[Hedge] Regression Check Failed
Andreas Kloeckner
andreas at tuck.ath.cx
Tue Oct 20 16:15:02 PDT 2009
Hi there,
I'm sorry to report that the regression check failed.
Details are attached.
- Your guilty conscience
-------------- next part --------------
============================= test session starts =============================
python: platform linux2 -- Python 2.5.4
test object 1: /tmp/regression-check/run-2009-10-20-0915/aksetup
test object 2: /tmp/regression-check/run-2009-10-20-0915/jhbuild
test object 3: /tmp/regression-check/run-2009-10-20-0915/pytools
test object 4: /tmp/regression-check/run-2009-10-20-0915/pymbolic
test object 5: /tmp/regression-check/run-2009-10-20-0915/pyublas
test object 6: /tmp/regression-check/run-2009-10-20-0915/boostmpi
test object 7: /tmp/regression-check/run-2009-10-20-0915/meshpy
test object 8: /tmp/regression-check/run-2009-10-20-0915/pylo
test object 9: /tmp/regression-check/run-2009-10-20-0915/codepy
test object 10: /tmp/regression-check/run-2009-10-20-0915/pycuda
test object 11: /tmp/regression-check/run-2009-10-20-0915/pyopencl
test object 12: /tmp/regression-check/run-2009-10-20-0915/pymetis
test object 13: /tmp/regression-check/run-2009-10-20-0915/hedge
test object 14: /tmp/regression-check/run-2009-10-20-0915/pyrticle
test object 15: /tmp/regression-check/run-2009-10-20-0915/pyublasext
test object 16: /tmp/regression-check/run-2009-10-20-0915/quiet-beam-sampling
pytools/test/test_data_table.py ........
pytools/test/test_math_stuff.py .
pymbolic/test/test_pymbolic.py ......
pyublas/test/test_pyublas.py ................
codepy/test/test_identical_symbols.py .
pycuda/test/test_abstract_array.py .FFFFFFFFFFF
pycuda/test/test_driver.py ................
pycuda/test/test_gpuarray.py .....................
pycuda/test/test_math.py .....................
pycuda/test/test_texture_nan.py .
pyopencl/test/test_wrapper.py ......
hedge/examples/advection/advection.py ...
hedge/examples/advection/var-velocity.py ...
hedge/examples/gas_dynamics/bgk-flow.py F
hedge/examples/gas_dynamics/euler/sine-wave.py F
hedge/examples/gas_dynamics/euler/vortex-sources.py F
hedge/examples/gas_dynamics/euler/vortex.py F
hedge/examples/heat/heat.py .
hedge/examples/maxwell/cavities.py ..FF
hedge/examples/maxwell/dipole.py .
hedge/examples/maxwell/maxwell-2d.py .
hedge/examples/maxwell/maxwell-pml.py .
hedge/examples/poisson/poisson.py F
hedge/examples/wave/var-velocity.py ...
hedge/examples/wave/wave.py .......
hedge/test/test_basics.py ..................
hedge/test/test_cuda.py .
hedge/test/test_jit_discretization.py ................
pyrticle/test/test_pyrticle.py .......
================================== FAILURES ===================================
____________________ TestAbstractArray.test_addition_array ____________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_addition_array(self):
"""Test the addition of two arrays."""
#test data
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:118:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
___________________ TestAbstractArray.test_addition_scalar ____________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_addition_scalar(self):
"""Test the addition of an array and a scalar."""
#test data
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:136:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
_____________________ TestAbstractArray.test_divide_array _____________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_divide_array(self):
"""Test the division of an array and a scalar. """
#test data
a = numpy.array([10,20,30,40,50,60,70,80,90,100]).astype(numpy.float32)
b = numpy.array([10,10,10,10,10,10,10,10,10,10]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:236:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 10., 20., 30., 40., 50., 60., 70., 80., 90., 100.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
____________________ TestAbstractArray.test_divide_scalar _____________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_divide_scalar(self):
"""Test the division of an array and a scalar."""
#test data
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:212:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
_________________________ TestAbstractArray.test_len __________________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_len(self):
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
> a_cpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:60:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
_______________________ TestAbstractArray.test_multiply _______________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_multiply(self):
"""Test the muliplication of an array with a scalar. """
#test data
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
____________________ TestAbstractArray.test_multiply_array ____________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_multiply_array(self):
"""Test the multiplication of two arrays."""
#test data
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:100:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
______________________ TestAbstractArray.test_pow_array _______________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_pow_array(self):
a = numpy.array([1,2,3,4,5]).astype(numpy.float32)
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:20:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
______________________ TestAbstractArray.test_pow_number ______________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_pow_number(self):
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
> a_cpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:34:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
___________________ TestAbstractArray.test_substract_array ____________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_substract_array(self):
"""Test the substraction of two arrays."""
#test data
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
b = numpy.array([10,20,30,40,50,60,70,80,90,100]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:160:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
___________________ TestAbstractArray.test_substract_scalar ___________________
self = <test_abstract_array.TestAbstractArray testMethod=run>
def test_substract_scalar(self):
"""Test the substraction of an array and a scalar."""
#test data
a = numpy.array([1,2,3,4,5,6,7,8,9,10]).astype(numpy.float32)
#convert a to a gpu object
> a_gpu = self.make_test_array(a)
pycuda/test/test_abstract_array.py:186:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <test_abstract_array.TestAbstractArray testMethod=run>
array = array([ 1., 2., 3., 4., 5., 6., 7., 8., 9., 10.], dtype=float32)
def make_test_array(self, array):
"""Turn a given numpy array into the kind of array that
is to be tested."""
> raise NotImplementedError
E NotImplementedError
pycuda/test/test_abstract_array.py:16: NotImplementedError
______________________________ test_euler_vortex ______________________________
@mark_test.long
def test_euler_vortex():
> main()
hedge/examples/gas_dynamics/bgk-flow.py:334:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
write_output = True
def main(write_output=True):
from hedge.backends import guess_run_context
rcon = guess_run_context(
#["cuda"]
)
for order in [3]:
problem = SolidBodyRotationProblem()
#problem = ShearLayerProblem()
if rcon.is_head_rank:
mesh = problem.make_mesh()
mesh_data = rcon.distribute_mesh(mesh)
from hedge.visualization import write_gnuplot_mesh
write_gnuplot_mesh("mesh.dat", mesh)
else:
mesh_data = rcon.receive_mesh()
discr = rcon.make_discretization(mesh_data, order=order,
default_scalar_type=numpy.float64)
from hedge.visualization import SiloVisualizer, VtkVisualizer
#vis = VtkVisualizer(discr, rcon, "bgk-%d" % order)
vis = SiloVisualizer(discr, rcon)
> from hedge.models.gas_dynamics.bgk_flow import BGKFlowOperator
E ImportError: No module named gas_dynamics.bgk_flow
hedge/examples/gas_dynamics/bgk-flow.py:228: ImportError
____________________________ test_euler_sine_wave _____________________________
@mark_test.long
def test_euler_sine_wave():
> main()
hedge/examples/gas_dynamics/euler/sine-wave.py:199:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
def main():
from hedge.backends import guess_run_context
platform = "cpu"
if platform == "gpu":
rcon = guess_run_context(["cuda"])
else:
rcon = guess_run_context()
from hedge.tools import EOCRecorder, to_obj_array
eoc_rec = EOCRecorder()
if rcon.is_head_rank:
from hedge.mesh import make_box_mesh
mesh = make_box_mesh((0,0,0), (10,10,10), max_volume=0.5)
mesh_data = rcon.distribute_mesh(mesh)
else:
mesh_data = rcon.receive_mesh()
for order in [3, 4, 5]:
discr = rcon.make_discretization(mesh_data, order=order,
default_scalar_type=numpy.float64)
from hedge.visualization import SiloVisualizer, VtkVisualizer
vis = VtkVisualizer(discr, rcon, "sinewave-%d" % order)
#vis = SiloVisualizer(discr, rcon)
sinewave = SineWave()
fields = sinewave.volume_interpolant(0, discr)
gamma, mu, prandtl, spec_gas_const = sinewave.properties()
from hedge.mesh import TAG_ALL
> from hedge.models.gas_dynamics import GasDynamicsOperator
E ImportError: No module named gas_dynamics
hedge/examples/gas_dynamics/euler/sine-wave.py:94: ImportError
______________________________ test_euler_vortex ______________________________
@mark_test.long
def test_euler_vortex():
> main(write_output=True)
hedge/examples/gas_dynamics/euler/vortex-sources.py:330:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
write_output = True
def main(write_output=True):
from hedge.backends import guess_run_context
rcon = guess_run_context(
#["cuda"]
)
gamma = 1.4
from hedge.tools import EOCRecorder, to_obj_array
eoc_rec = EOCRecorder()
if rcon.is_head_rank:
from hedge.mesh import \
make_rect_mesh, \
make_centered_regular_rect_mesh
refine = 1
mesh = make_centered_regular_rect_mesh((0,-5), (10,5), n=(9,9),
post_refine_factor=refine)
mesh_data = rcon.distribute_mesh(mesh)
else:
mesh_data = rcon.receive_mesh()
for order in [4]:
discr = rcon.make_discretization(mesh_data, order=order,
debug=[#"cuda_no_plan",
#"print_op_code"
],
default_scalar_type=numpy.float64)
from hedge.visualization import SiloVisualizer, VtkVisualizer
#vis = VtkVisualizer(discr, rcon, "vortex-%d" % order)
vis = SiloVisualizer(discr, rcon)
vortex = Vortex(beta=5, gamma=gamma,
center=[5,0],
velocity=[1,0], densityA=1.0)
fields = vortex.volume_interpolant(0, discr)
sources=SourceTerms(beta=5, gamma=gamma,
center=[5,0],
velocity=[1,0], densityA=1.0)
> from hedge.models.gas_dynamics import GasDynamicsOperator
E ImportError: No module named gas_dynamics
hedge/examples/gas_dynamics/euler/vortex-sources.py:189: ImportError
______________________________ test_euler_vortex ______________________________
@mark_test.long
def test_euler_vortex():
> main()
hedge/examples/gas_dynamics/euler/vortex.py:253:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
write_output = True
def main(write_output=True):
from hedge.backends import guess_run_context
rcon = guess_run_context(
#["cuda"]
)
from hedge.tools import EOCRecorder, to_obj_array
eoc_rec = EOCRecorder()
if rcon.is_head_rank:
from hedge.mesh import \
make_rect_mesh, \
make_centered_regular_rect_mesh
refine = 4
mesh = make_centered_regular_rect_mesh((0,-5), (10,5), n=(9,9),
post_refine_factor=refine)
mesh_data = rcon.distribute_mesh(mesh)
from hedge.visualization import write_gnuplot_mesh
write_gnuplot_mesh("mesh.dat", mesh)
else:
mesh_data = rcon.receive_mesh()
for order in [3, 4, 5]:
discr = rcon.make_discretization(mesh_data, order=order,
default_scalar_type=numpy.float64)
from hedge.visualization import SiloVisualizer, VtkVisualizer
#vis = VtkVisualizer(discr, rcon, "vortex-%d" % order)
vis = SiloVisualizer(discr, rcon)
vortex = Vortex()
fields = vortex.volume_interpolant(0, discr)
gamma, mu, prandtl, spec_gas_const = vortex.properties()
> from hedge.models.gas_dynamics import GasDynamicsOperator
E ImportError: No module named gas_dynamics
hedge/examples/gas_dynamics/euler/vortex.py:115: ImportError
________________________ test_cuda['SP CUDA Maxwell'] _________________________
dtype = <type 'numpy.float32'>
def do_test_maxwell_cavities_cuda(dtype):
import py.test
try:
import pycuda.autoinit
except ImportError:
py.test.skip()
main(write_output=False, allow_features=["cuda"],
extra_discr_args=dict(
init_cuda=False,
debug=["cuda_no_plan"],
> default_scalar_type=dtype,
hedge/examples/maxwell/cavities.py:237:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
write_output = False, allow_features = ['cuda'], flux_type_arg = 1
bdry_flux_type_arg = None
extra_discr_args = {'debug': ['cuda_no_plan'], 'default_scalar_type': <type 'numpy.float32'>, 'init_cuda': False}
def main(write_output=True, allow_features=None, flux_type_arg=1,
bdry_flux_type_arg=None, extra_discr_args={}):
from hedge.element import TetrahedralElement
from hedge.timestep import RK4TimeStepper
from hedge.mesh import make_ball_mesh, make_cylinder_mesh, make_box_mesh
from hedge.tools import EOCRecorder, to_obj_array
from math import sqrt, pi
from analytic_solutions import \
check_time_harmonic_solution, \
RealPartAdapter, \
SplitComplexAdapter, \
CylindricalFieldAdapter, \
CylindricalCavityMode, \
RectangularWaveguideMode, \
RectangularCavityMode
from hedge.models.em import MaxwellOperator
from hedge.backends import guess_run_context
rcon = guess_run_context(allow_features)
epsilon0 = 8.8541878176e-12 # C**2 / (N m**2)
mu0 = 4*pi*1e-7 # N/A**2.
epsilon = 1*epsilon0
mu = 1*mu0
eoc_rec = EOCRecorder()
cylindrical = False
periodic = False
if cylindrical:
R = 1
d = 2
mode = CylindricalCavityMode(m=1, n=1, p=1,
radius=R, height=d,
epsilon=epsilon, mu=mu)
r_sol = CylindricalFieldAdapter(RealPartAdapter(mode))
c_sol = SplitComplexAdapter(CylindricalFieldAdapter(mode))
if rcon.is_head_rank:
mesh = make_cylinder_mesh(radius=R, height=d, max_volume=0.01)
else:
if periodic:
mode = RectangularWaveguideMode(epsilon, mu, (3,2,1))
periodicity = (False, False, True)
else:
periodicity = None
mode = RectangularCavityMode(epsilon, mu, (1,2,2))
if rcon.is_head_rank:
mesh = make_box_mesh(max_volume=0.001, periodicity=periodicity)
if rcon.is_head_rank:
mesh_data = rcon.distribute_mesh(mesh)
else:
mesh_data = rcon.receive_mesh()
for order in [1,2,3,4,5,6]:
discr = rcon.make_discretization(mesh_data, order=order,
**extra_discr_args)
from hedge.visualization import VtkVisualizer
if write_output:
vis = VtkVisualizer(discr, rcon, "em-%d" % order)
mode.set_time(0)
def get_true_field():
return discr.convert_volume(
to_obj_array(mode(discr)
.real.astype(discr.default_scalar_type).copy()),
kind=discr.compute_kind)
fields = get_true_field()
op = MaxwellOperator(epsilon, mu, \
flux_type=flux_type_arg, \
bdry_flux_type=bdry_flux_type_arg)
dt = discr.dt_factor(op.max_eigenvalue())
final_time = 0.5e-9
nsteps = int(final_time/dt)+1
dt = final_time/nsteps
if rcon.is_head_rank:
print "---------------------------------------------"
print "order %d" % order
print "---------------------------------------------"
print "dt", dt
print "nsteps", nsteps
print "#elements=", len(mesh.elements)
stepper = RK4TimeStepper()
# diagnostics setup ---------------------------------------------------
from pytools.log import LogManager, add_general_quantities, \
add_simulation_quantities, add_run_info
if write_output:
log_file_name = "maxwell-%d.dat" % order
else:
log_file_name = None
logmgr = LogManager(log_file_name, "w", rcon.communicator)
add_run_info(logmgr)
add_general_quantities(logmgr)
add_simulation_quantities(logmgr, dt)
discr.add_instrumentation(logmgr)
stepper.add_instrumentation(logmgr)
from pytools.log import IntervalTimer
vis_timer = IntervalTimer("t_vis", "Time spent visualizing")
logmgr.add_quantity(vis_timer)
from hedge.log import EMFieldGetter, add_em_quantities
field_getter = EMFieldGetter(discr, op, lambda: fields)
add_em_quantities(logmgr, op, field_getter)
logmgr.add_watches(
["step.max", "t_sim.max",
("W_field", "W_el+W_mag"),
"t_step.max"]
)
# timestep loop -------------------------------------------------------
t = 0
rhs = op.bind(discr)
try:
for step in range(nsteps):
> logmgr.tick()
hedge/examples/maxwell/cavities.py:156:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <pytools.log.LogManager object at 0x6949e10>
def tick(self):
"""Record data points from each added L{LogQuantity}.
May also checkpoint data to disk, and/or synchronize data points
to the head rank.
"""
tick_start_time = time()
def insert_datapoint(name, value):
if value is None:
return
self.last_values[name] = value
try:
self.db_conn.execute("insert into %s values (?,?,?)" % name,
(self.tick_count, self.rank, float(value)))
except:
print "while adding datapoint for '%s':" % name
raise
for gd in self.gather_descriptors:
if self.tick_count % gd.interval == 0:
> q_value = gd.quantity()
env/lib/python2.5/site-packages/pytools-10-py2.5.egg/pytools/log.py:483:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.log.EMFieldDivergenceD object at 0xea7d150>
def __call__(self):
max_op = self.fields.maxwell_op
d = max_op.epsilon * self.fields.e
> div_d = self.bound_div_op(d)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/log.py:247:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
v = array([ [ 2.13440222e-31 -3.52675083e-13 -2.06015305e-12 ..., 0.00000000e...3e-13 ..., 0.00000000e+00
0.00000000e+00 0.00000000e+00]], dtype=object)
def op(v):
from hedge.mesh import TAG_ALL
return compiled_op_template(v=v,
> bc=discr.boundarize_volume_field(v, TAG_ALL))
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/models/nd_calculus.py:132:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.cuda.execute.Executor object at 0xea7dbd0>
def __call__(self, **vars):
def pre_assign_check(tgt, value):
if numpy.isnan(self.discr.convert_volume(value, kind="numpy")).any():
print "%s was assigned a nan-containing value." % tgt
return self.code.execute(
> self.discr.exec_mapper_class(vars, self),
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/cuda/execute.py:512:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.compiler.Code object at 0x5db8710>
exec_mapper = <hedge.backends.cuda.execute.ExecutionMapper object at 0x7c2f590>
pre_assign_check = None
def execute(self, exec_mapper, pre_assign_check=None):
context = exec_mapper.context
futures = []
done_insns = set()
quit_flag = False
force_future = False
while not quit_flag:
# check futures for completion
i = 0
while i < len(futures):
future = futures[i]
if force_future or future.is_ready():
assignments, new_futures = future()
for target, value in assignments:
if pre_assign_check is not None:
pre_assign_check(target, value)
context[target] = value
futures.extend(new_futures)
futures.pop(i)
force_future = False
else:
i += 1
del future
# pick the next insn
try:
insn, discardable_vars = self.get_next_step(
frozenset(context.keys()),
frozenset(done_insns))
except self.NoInstructionAvailable:
if futures:
# no insn ready: we need a future to complete to continue
force_future = True
else:
# no futures, no available instructions: we're done
quit_flag = True
else:
for name in discardable_vars:
del context[name]
done_insns.add(insn)
assignments, new_futures = \
> insn.get_executor_method(exec_mapper)(insn)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/compiler.py:393:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.cuda.execute.ExecutionMapper object at 0x7c2f590>
insn = CUDAFluxBatchAssign(kind='whole-domain', fluxes=[WholeDomainFluxOperator(True,...backends.cuda.execute.OperatorCompiler object at 0xe8ee310>>, names=['_expr3'])
def exec_flux_batch_assign(self, insn):
discr = self.executor.discr
kernel = insn.kernel(self.executor)
> all_fofs = kernel(self.rec, discr.fluxlocal_plan)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/cuda/execute.py:210:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.cuda.fluxgather.Kernel instance at 0x5d15b00>
eval_dependency = <bound method ExecutionMapper.rec of <hedge.backends.cuda.execute.ExecutionMapper object at 0x7c2f590>>
lift_plan = <hedge.backends.cuda.el_local_shared_segmat.ExecutionPlan object at 0x6949990>
def __call__(self, eval_dependency, lift_plan):
discr = self.discr
given = self.plan.given
elgroup, = discr.element_groups
all_fluxes_on_faces = [gpuarray.empty(
given.matmul_preimage_shape(lift_plan),
dtype=given.float_type,
allocator=discr.pool.allocate)
for i in range(len(self.fluxes))]
fdata = self.flux_face_data_block(elgroup)
ilist_data = self.index_list_data()
gather, texref_map = self.get_kernel(fdata, ilist_data,
> for_benchmark=False)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/cuda/fluxgather.py:415:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.cuda.fluxgather.Kernel instance at 0x5d15b00>
fdata = SuperblockedDataStructure(fp_count=6227, ext_fp_count=4230, int_fp_count=1413,...\x00\x00', device_memory=<pycuda._driver.DeviceAllocation object at 0xf0143d0>)
ilist_data = GPUIndexLists(type=<type 'numpy.uint8'>, code=[<codepy.cgen.Typedef object at ... bytes=69, device_memory=<pycuda._driver.DeviceAllocation object at 0xf014360>)
for_benchmark = False
> ???
<string>:1:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
method = <function get_kernel at 0x5e08938>
instance = <hedge.backends.cuda.fluxgather.Kernel instance at 0x5d15b00>
@decorator
def memoize_method(method, instance, *args):
dicname = "_memoize_dic_"+method.__name__
try:
return getattr(instance, dicname)[args]
except AttributeError:
> result = method(instance, *args)
env/lib/python2.5/site-packages/pytools-10-py2.5.egg/pytools/__init__.py:154:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.cuda.fluxgather.Kernel instance at 0x5d15b00>
fdata = SuperblockedDataStructure(fp_count=6227, ext_fp_count=4230, int_fp_count=1413,...\x00\x00', device_memory=<pycuda._driver.DeviceAllocation object at 0xf0143d0>)
ilist_data = GPUIndexLists(type=<type 'numpy.uint8'>, code=[<codepy.cgen.Typedef object at ... bytes=69, device_memory=<pycuda._driver.DeviceAllocation object at 0xf014360>)
for_benchmark = False
@memoize_method
def get_kernel(self, fdata, ilist_data, for_benchmark):
from codepy.cgen.cuda import CudaShared, CudaGlobal
from pycuda.tools import dtype_to_ctype
discr = self.discr
given = self.plan.given
fplan = self.plan
d = discr.dimensions
dims = range(d)
elgroup, = discr.element_groups
float_type = given.float_type
f_decl = CudaGlobal(FunctionDeclaration(Value("void", "apply_flux"),
[
Pointer(POD(float_type, "debugbuf")),
Pointer(POD(numpy.uint8, "gmem_facedata")),
]+[
Pointer(POD(float_type, "gmem_fluxes_on_faces%d" % flux_nr))
for flux_nr in range(len(self.fluxes))
]
))
cmod = Module()
cmod.append(Include("pycuda-helpers.hpp"))
for dep_expr in self.all_deps:
cmod.extend([
Value("texture<%s, 1, cudaReadModeElementType>"
> % dtype_to_ctype(float_type, with_fp_tex_hack=True),
"field%d_tex" % self.dep_to_index[dep_expr])
E TypeError: dtype_to_ctype() got an unexpected keyword argument 'with_fp_tex_hack'
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/cuda/fluxgather.py:756: TypeError
------------------------------- Captured stdout -------------------------------
microblocking=True -> time=0
actual flux exec plan: regs=51(+205) threads=33 smem=1408 occ=0.312500 pfaces=11 mbs_per_block=1 mb_elements=4
actual diff op exec plan: seg_matrix regs=16(+112) threads=112 smem=896 occ=1.000000 par=(p7) segment_size=16 unroll=4
actual flux local exec plan: seg_matrix regs=13(+115) threads=112 smem=1344 occ=1.000000 par=(p7) segment_size=16 unroll=12 prefetch_branch=True
---------------------------------------------
order 1
---------------------------------------------
dt 2.27272727273e-11
nsteps 22
#elements= 1910
------------------------------- Captured stderr -------------------------------
/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/cuda/__init__.py:365: UserWarning: You can achieve better performance if you pass an optemplate in the tune_for= kwarg.
warn("You can achieve better performance if you pass an optemplate "
________________________ test_cuda['DP CUDA Maxwell'] _________________________
dtype = <type 'numpy.float64'>
def do_test_maxwell_cavities_cuda(dtype):
import py.test
try:
import pycuda.autoinit
except ImportError:
py.test.skip()
main(write_output=False, allow_features=["cuda"],
extra_discr_args=dict(
init_cuda=False,
debug=["cuda_no_plan"],
> default_scalar_type=dtype,
hedge/examples/maxwell/cavities.py:237:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
write_output = False, allow_features = ['cuda'], flux_type_arg = 1
bdry_flux_type_arg = None
extra_discr_args = {'debug': ['cuda_no_plan'], 'default_scalar_type': <type 'numpy.float64'>, 'init_cuda': False}
def main(write_output=True, allow_features=None, flux_type_arg=1,
bdry_flux_type_arg=None, extra_discr_args={}):
from hedge.element import TetrahedralElement
from hedge.timestep import RK4TimeStepper
from hedge.mesh import make_ball_mesh, make_cylinder_mesh, make_box_mesh
from hedge.tools import EOCRecorder, to_obj_array
from math import sqrt, pi
from analytic_solutions import \
check_time_harmonic_solution, \
RealPartAdapter, \
SplitComplexAdapter, \
CylindricalFieldAdapter, \
CylindricalCavityMode, \
RectangularWaveguideMode, \
RectangularCavityMode
from hedge.models.em import MaxwellOperator
from hedge.backends import guess_run_context
rcon = guess_run_context(allow_features)
epsilon0 = 8.8541878176e-12 # C**2 / (N m**2)
mu0 = 4*pi*1e-7 # N/A**2.
epsilon = 1*epsilon0
mu = 1*mu0
eoc_rec = EOCRecorder()
cylindrical = False
periodic = False
if cylindrical:
R = 1
d = 2
mode = CylindricalCavityMode(m=1, n=1, p=1,
radius=R, height=d,
epsilon=epsilon, mu=mu)
r_sol = CylindricalFieldAdapter(RealPartAdapter(mode))
c_sol = SplitComplexAdapter(CylindricalFieldAdapter(mode))
if rcon.is_head_rank:
mesh = make_cylinder_mesh(radius=R, height=d, max_volume=0.01)
else:
if periodic:
mode = RectangularWaveguideMode(epsilon, mu, (3,2,1))
periodicity = (False, False, True)
else:
periodicity = None
mode = RectangularCavityMode(epsilon, mu, (1,2,2))
if rcon.is_head_rank:
mesh = make_box_mesh(max_volume=0.001, periodicity=periodicity)
if rcon.is_head_rank:
mesh_data = rcon.distribute_mesh(mesh)
else:
mesh_data = rcon.receive_mesh()
for order in [1,2,3,4,5,6]:
discr = rcon.make_discretization(mesh_data, order=order,
**extra_discr_args)
from hedge.visualization import VtkVisualizer
if write_output:
vis = VtkVisualizer(discr, rcon, "em-%d" % order)
mode.set_time(0)
def get_true_field():
return discr.convert_volume(
to_obj_array(mode(discr)
.real.astype(discr.default_scalar_type).copy()),
kind=discr.compute_kind)
fields = get_true_field()
op = MaxwellOperator(epsilon, mu, \
flux_type=flux_type_arg, \
bdry_flux_type=bdry_flux_type_arg)
dt = discr.dt_factor(op.max_eigenvalue())
final_time = 0.5e-9
nsteps = int(final_time/dt)+1
dt = final_time/nsteps
if rcon.is_head_rank:
print "---------------------------------------------"
print "order %d" % order
print "---------------------------------------------"
print "dt", dt
print "nsteps", nsteps
print "#elements=", len(mesh.elements)
stepper = RK4TimeStepper()
# diagnostics setup ---------------------------------------------------
from pytools.log import LogManager, add_general_quantities, \
add_simulation_quantities, add_run_info
if write_output:
log_file_name = "maxwell-%d.dat" % order
else:
log_file_name = None
logmgr = LogManager(log_file_name, "w", rcon.communicator)
add_run_info(logmgr)
add_general_quantities(logmgr)
add_simulation_quantities(logmgr, dt)
discr.add_instrumentation(logmgr)
stepper.add_instrumentation(logmgr)
from pytools.log import IntervalTimer
vis_timer = IntervalTimer("t_vis", "Time spent visualizing")
logmgr.add_quantity(vis_timer)
from hedge.log import EMFieldGetter, add_em_quantities
field_getter = EMFieldGetter(discr, op, lambda: fields)
add_em_quantities(logmgr, op, field_getter)
logmgr.add_watches(
["step.max", "t_sim.max",
("W_field", "W_el+W_mag"),
"t_step.max"]
)
# timestep loop -------------------------------------------------------
t = 0
rhs = op.bind(discr)
try:
for step in range(nsteps):
> logmgr.tick()
hedge/examples/maxwell/cavities.py:156:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <pytools.log.LogManager object at 0x68d2490>
def tick(self):
"""Record data points from each added L{LogQuantity}.
May also checkpoint data to disk, and/or synchronize data points
to the head rank.
"""
tick_start_time = time()
def insert_datapoint(name, value):
if value is None:
return
self.last_values[name] = value
try:
self.db_conn.execute("insert into %s values (?,?,?)" % name,
(self.tick_count, self.rank, float(value)))
except:
print "while adding datapoint for '%s':" % name
raise
for gd in self.gather_descriptors:
if self.tick_count % gd.interval == 0:
> q_value = gd.quantity()
env/lib/python2.5/site-packages/pytools-10-py2.5.egg/pytools/log.py:483:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.log.EMFieldDivergenceD object at 0x609c2d0>
def __call__(self):
max_op = self.fields.maxwell_op
d = max_op.epsilon * self.fields.e
> div_d = self.bound_div_op(d)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/log.py:247:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
v = array([ [ 2.13440209e-31 -3.52675062e-13 -2.06015285e-12 ..., 0.00000000e...1e-13 ..., 0.00000000e+00
0.00000000e+00 0.00000000e+00]], dtype=object)
def op(v):
from hedge.mesh import TAG_ALL
return compiled_op_template(v=v,
> bc=discr.boundarize_volume_field(v, TAG_ALL))
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/models/nd_calculus.py:132:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.cuda.Discretization object at 0xe8d2510>
field = array([ [ 2.13440209e-31 -3.52675062e-13 -2.06015285e-12 ..., 0.00000000e...1e-13 ..., 0.00000000e+00
0.00000000e+00 0.00000000e+00]], dtype=object)
tag = <class 'hedge.mesh.TAG_ALL'>, kind = None
def boundarize_volume_field(self, field, tag, kind=None):
if self.get_kind(field) == self.compute_kind:
from hedge.tools import log_shape
ls = log_shape(field)
if kind is None or kind == self.compute_kind:
# GPU -> GPU boundarize
from_indices, to_indices = \
self._gpu_boundarize_info(tag)
kind = None
from hedge.mesh import TAG_ALL
if tag != TAG_ALL:
make_new = self.boundary_zeros
else:
make_new = self.boundary_empty
if ls != ():
from pytools import single_valued
out = result = make_new(tag, shape=ls,
dtype=single_valued(f.dtype for f in field))
src = field
else:
result = make_new(tag, dtype=field.dtype)
out = [result]
src = [field]
gpuarray.multi_take_put(src,
> to_indices, from_indices, out=out)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/cuda/__init__.py:1186:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
arrays = array([ [ 2.13440209e-31 -3.52675062e-13 -2.06015285e-12 ..., 0.00000000e...1e-13 ..., 0.00000000e+00
0.00000000e+00 0.00000000e+00]], dtype=object)
dest_indices = array([ 0, 1, 2, ..., 9328, 9329, 9330], dtype=uint32)
src_indices = array([4544, 4545, 4547, ..., 5028, 5029, 5031], dtype=uint32)
dest_shape = None
out = array([ [ -3.62364191e-218 9.15054450e-005 3.80326120e-004 ...,
3.46742...07 ...,
8.32576560e-221 -1.38985941e-091 -1.38985941e-091]], dtype=object)
stream = None
def multi_take_put(arrays, dest_indices, src_indices, dest_shape=None,
out=None, stream=None):
if not len(arrays):
return []
from pytools import single_valued
a_dtype = single_valued(a.dtype for a in arrays)
a_allocator = arrays[0].allocator
vec_count = len(arrays)
if out is None:
out = [GPUArray(dest_shape, a_dtype, a_allocator)
for i in range(vec_count)]
else:
assert a_dtype == single_valued(o.dtype for o in out)
assert src_indices.dtype == dest_indices.dtype
assert len(src_indices.shape) == 1
assert src_indices.shape == dest_indices.shape
assert len(out) == len(arrays)
func, tex_src = elementwise.get_take_put_kernel(
> a_dtype, src_indices.dtype, vec_count=vec_count)
env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/gpuarray.py:683:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
dtype = dtype('float64'), idx_dtype = dtype('uint32'), vec_count = 3
> ???
<string>:1:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
func = <function get_take_put_kernel at 0x24a6488>
@decorator
def memoize(func, *args):
# by Michele Simionato
# http://www.phyast.pitt.edu/~micheles/python/
try:
return func._memoize_dic[args]
except AttributeError:
# _memoize_dic doesn't exist yet.
result = func(*args)
func._memoize_dic = {args: result}
return result
except KeyError:
> result = func(*args)
env/lib/python2.5/site-packages/pytools-10-py2.5.egg/pytools/__init__.py:140:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
dtype = dtype('float64'), idx_dtype = dtype('uint32'), vec_count = 3
@memoize
def get_take_put_kernel(dtype, idx_dtype, vec_count=1):
ctx = {
"idx_tp": dtype_to_ctype(idx_dtype),
"tp": dtype_to_ctype(dtype),
}
args = ("%(idx_tp)s *gmem_dest_idx, %(idx_tp)s *gmem_src_idx,"
+", ".join("%(tp)s *dest"+str(i)
for i in range(vec_count))
+", unsigned n") % ctx
preamble = "\n".join(
"texture <%s, 1, cudaReadModeElementType> tex_src%d;" % (ctx["tp"], i)
for i in range(vec_count))
body = (
("%(idx_tp)s src_idx = gmem_src_idx[i];\n"
"%(idx_tp)s dest_idx = gmem_dest_idx[i];\n" % ctx)
+ "\n".join(
"dest%d[dest_idx] = tex1Dfetch(tex_src%d, src_idx);" % (i, i)
for i in range(vec_count)))
> mod = get_elwise_module(args, body, "take_put", preamble=preamble)
env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/elementwise.py:171:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
arguments = 'unsigned int *gmem_dest_idx, unsigned int *gmem_src_idx,double *dest0, double *dest1, double *dest2, unsigned n'
operation = 'unsigned int src_idx = gmem_src_idx[i];\nunsigned int dest_idx = gmem_dest_idx[i];\ndest0[dest_idx] = tex1Dfetch(tex_src0, src_idx);\ndest1[dest_idx] = tex1Dfetch(tex_src1, src_idx);\ndest2[dest_idx] = tex1Dfetch(tex_src2, src_idx);'
name = 'take_put', keep = False, options = []
preamble = 'texture <double, 1, cudaReadModeElementType> tex_src0;\ntexture <double, 1, cudaReadModeElementType> tex_src1;\ntexture <double, 1, cudaReadModeElementType> tex_src2;'
def get_elwise_module(arguments, operation,
name="kernel", keep=False, options=[], preamble=""):
from pycuda.compiler import SourceModule
return SourceModule("""
%(preamble)s
__global__ void %(name)s(%(arguments)s)
{
unsigned tid = threadIdx.x;
unsigned total_threads = gridDim.x*blockDim.x;
unsigned cta_start = blockDim.x*blockIdx.x;
unsigned i;
for (i = cta_start + tid; i < n; i += total_threads)
{
%(operation)s;
}
}
""" % {
"arguments": arguments,
"operation": operation,
"name": name,
"preamble": preamble},
> options=options, keep=keep)
def get_elwise_kernel_and_types(arguments, operation,
name="kernel", keep=False, options=[]):
env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/elementwise.py:64:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <pycuda.compiler.SourceModule object at 0x5bfe250>
source = '\n texture <double, 1, cudaReadModeElementType> tex_src0;\ntexture <double, 1, cudaReadModeElementType> tex_sr... = tex1Dfetch(tex_src1, src_idx);\ndest2[dest_idx] = tex1Dfetch(tex_src2, src_idx);;\n }\n }\n '
nvcc = 'nvcc', options = [], keep = False, no_extern_c = False, arch = None
code = None, cache_dir = None, include_dirs = []
def __init__(self, source, nvcc="nvcc", options=[], keep=False,
no_extern_c=False, arch=None, code=None, cache_dir=None,
include_dirs=[]):
cubin = compile(source, nvcc, options, keep, no_extern_c,
> arch, code, cache_dir, include_dirs)
env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/compiler.py:191:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
source = 'extern "C" {\n\n texture <double, 1, cudaReadModeElementType> tex_src0;\ntexture <double, 1, cudaReadModeEleme...x1Dfetch(tex_src1, src_idx);\ndest2[dest_idx] = tex1Dfetch(tex_src2, src_idx);;\n }\n }\n \n}\n'
nvcc = 'nvcc'
options = ['-arch', 'sm_13', '-I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/../include/pycuda']
keep = False, no_extern_c = False, arch = 'sm_13', code = None
cache_dir = '/tmp/pycuda-compiler-cache-v1-uid1000'
include_dirs = ['/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/../include/pycuda']
def compile(source, nvcc="nvcc", options=[], keep=False,
no_extern_c=False, arch=None, code=None, cache_dir=None,
include_dirs=[]):
if not no_extern_c:
source = 'extern "C" {\n%s\n}\n' % source
options = options[:]
if arch is None:
try:
from pycuda.driver import Context
arch = "sm_%d%d" % Context.get_device().compute_capability()
except RuntimeError:
pass
if cache_dir is None:
from os.path import join
from tempfile import gettempdir
cache_dir = join(gettempdir(),
"pycuda-compiler-cache-v1-%s" % _get_per_user_string())
from os import mkdir
try:
mkdir(cache_dir)
except OSError, e:
from errno import EEXIST
if e.errno != EEXIST:
raise
if arch is not None:
options.extend(["-arch", arch])
if code is not None:
options.extend(["-code", code])
include_dirs = include_dirs + [_find_pycuda_include_path()]
for i in include_dirs:
options.append("-I"+i)
> return compile_plain(source, options, keep, nvcc, cache_dir)
env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/compiler.py:181:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
source = 'extern "C" {\n\n texture <double, 1, cudaReadModeElementType> tex_src0;\ntexture <double, 1, cudaReadModeEleme...x1Dfetch(tex_src1, src_idx);\ndest2[dest_idx] = tex1Dfetch(tex_src2, src_idx);;\n }\n }\n \n}\n'
options = ['-arch', 'sm_13', '-I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/../include/pycuda']
keep = False, nvcc = 'nvcc'
cache_dir = '/tmp/pycuda-compiler-cache-v1-uid1000'
def compile_plain(source, options, keep, nvcc, cache_dir):
from os.path import join
if cache_dir:
checksum = _new_md5()
checksum.update(source)
for option in options:
checksum.update(option)
checksum.update(get_nvcc_version(nvcc))
cache_file = checksum.hexdigest()
cache_path = join(cache_dir, cache_file + ".cubin")
try:
return open(cache_path, "r").read()
except:
pass
from tempfile import mkdtemp
file_dir = mkdtemp()
file_root = "kernel"
cu_file_name = file_root + ".cu"
cu_file_path = join(file_dir, cu_file_name)
outf = open(cu_file_path, "w")
outf.write(str(source))
outf.close()
if keep:
options = options[:]
options.append("--keep")
print "*** compiler output in %s" % file_dir
from pytools.prefork import call
try:
result = call([nvcc, "--cubin"]
+ options
+ [cu_file_name],
cwd=file_dir)
except OSError, e:
raise OSError, "%s was not found (is it on the PATH?) [%s]" % (
nvcc, str(e))
if result != 0:
from pycuda.driver import CompileError
> raise CompileError, "nvcc compilation of %s failed" % cu_file_path
E CompileError: nvcc compilation of /tmp/tmpajWh9X/kernel.cu failed
env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg/pycuda/compiler.py:79: CompileError
------------------------------- Captured stdout -------------------------------
microblocking=True -> time=0
actual flux exec plan: regs=51(+205) threads=33 smem=2432 occ=0.312500 pfaces=11 mbs_per_block=1 mb_elements=4
actual diff op exec plan: seg_matrix regs=16(+112) threads=112 smem=1664 occ=1.000000 par=(p7) segment_size=16 unroll=4
actual flux local exec plan: seg_matrix regs=13(+51) threads=240 smem=3584 occ=1.000000 par=(p15) segment_size=16 unroll=12 prefetch_branch=True
---------------------------------------------
order 1
---------------------------------------------
dt 2.27272727273e-11
nsteps 22
#elements= 1910
------------------------------- Captured stderr -------------------------------
kernel.cu(19): error: no instance of overloaded function "tex1Dfetch" matches the argument list
argument types are: (texture<double, 1, cudaReadModeElementType>, unsigned int)
kernel.cu(20): error: no instance of overloaded function "tex1Dfetch" matches the argument list
argument types are: (texture<double, 1, cudaReadModeElementType>, unsigned int)
kernel.cu(21): error: no instance of overloaded function "tex1Dfetch" matches the argument list
argument types are: (texture<double, 1, cudaReadModeElementType>, unsigned int)
3 errors detected in the compilation of "/tmp/tmpxft_0000261f_00000000-4_kernel.cpp1.ii".
________________________________ test_poisson _________________________________
@mark_test.long
def test_poisson():
> main(write_output=False)
hedge/examples/poisson/poisson.py:125:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
write_output = False
def main(write_output=True):
from hedge.data import GivenFunction, ConstantGivenFunction
from hedge.backends import guess_run_context
rcon = guess_run_context()
dim = 2
def boundary_tagger(fvi, el, fn, points):
from math import atan2, pi
normal = el.face_normals[fn]
if -10/180*pi < atan2(normal[1], normal[0]) < 10/180*pi:
return ["neumann"]
else:
return ["dirichlet"]
if dim == 2:
if rcon.is_head_rank:
from hedge.mesh import make_disk_mesh
mesh = make_disk_mesh(r=0.5, boundary_tagger=boundary_tagger,
max_area=1e-2)
elif dim == 3:
if rcon.is_head_rank:
from hedge.mesh import make_ball_mesh
mesh = make_ball_mesh(max_volume=0.0001,
boundary_tagger=lambda fvi, el, fn, points:
["dirichlet"])
else:
raise RuntimeError, "bad number of dimensions"
if rcon.is_head_rank:
print "%d elements" % len(mesh.elements)
mesh_data = rcon.distribute_mesh(mesh)
else:
mesh_data = rcon.receive_mesh()
discr = rcon.make_discretization(mesh_data, order=5,
> debug=["cuda_no_plan"])
hedge/examples/poisson/poisson.py:65:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.SerialRunContext object at 0xf019c90>
mesh_data = ConformalMesh(periodic_opposite_faces={}, elements=[Triangle(map=<hedge._inter....067807653419383315, 0.031395259764656694, 0.067807653419383315], id=62), 1)]})
def make_discretization(self, mesh_data, *args, **kwargs):
> return self.discr_class(mesh_data, *args, **kwargs)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/__init__.py:116:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.jit.Discretization object at 0x7adf790>
def __init__(self, *args, **kwargs):
toolchain = kwargs.pop("toolchain", None)
# tolerate (and ignore) the CUDA backend's tune_for argument
_ = kwargs.pop("tune_for", None)
> hedge.discretization.Discretization.__init__(self, *args, **kwargs)
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/backends/jit/__init__.py:325:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <hedge.backends.jit.Discretization object at 0x7adf790>
mesh = ConformalMesh(periodic_opposite_faces={}, elements=[Triangle(map=<hedge._inter....067807653419383315, 0.031395259764656694, 0.067807653419383315], id=62), 1)]})
local_discretization = <hedge.element.TriangularElement object at 0x3a77890>
order = 5, debug = set(['cuda_no_plan'])
default_scalar_type = <type 'numpy.float64'>, run_context = None
def __init__(self, mesh, local_discretization=None,
order=None, debug=set(), default_scalar_type=numpy.float64,
run_context=None):
"""
:param debug: A set of strings indicating which debug checks should
be activated. See validity check below for the currently defined
set of debug flags.
"""
if not isinstance(mesh, hedge.mesh.Mesh):
raise TypeError("mesh must be of type hedge.mesh.Mesh")
self.mesh = mesh
local_discretization = self.get_local_discretization(
mesh, local_discretization, order)
self.dimensions = local_discretization.dimensions
debug = set(debug)
> assert not debug.difference(self.all_debug_flags()), "Invalid debug flag specified"
E AssertionError: Invalid debug flag specified
env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/discretization.py:310: AssertionError
------------------------------- Captured stdout -------------------------------
148 elements
======================== 14 tests deselected by '-mpi' ========================
========== 18 failed, 162 passed, 14 deselected in 18842.79 seconds ===========
-------------- next part --------------
============================= test session starts =============================
python: platform linux2 -- Python 2.5.4
test object 1: /tmp/regression-check/run-2009-10-20-0915/aksetup
test object 2: /tmp/regression-check/run-2009-10-20-0915/jhbuild
test object 3: /tmp/regression-check/run-2009-10-20-0915/pytools
test object 4: /tmp/regression-check/run-2009-10-20-0915/pymbolic
test object 5: /tmp/regression-check/run-2009-10-20-0915/pyublas
test object 6: /tmp/regression-check/run-2009-10-20-0915/boostmpi
test object 7: /tmp/regression-check/run-2009-10-20-0915/meshpy
test object 8: /tmp/regression-check/run-2009-10-20-0915/pylo
test object 9: /tmp/regression-check/run-2009-10-20-0915/codepy
test object 10: /tmp/regression-check/run-2009-10-20-0915/pycuda
test object 11: /tmp/regression-check/run-2009-10-20-0915/pyopencl
test object 12: /tmp/regression-check/run-2009-10-20-0915/pymetis
test object 13: /tmp/regression-check/run-2009-10-20-0915/hedge
test object 14: /tmp/regression-check/run-2009-10-20-0915/pyrticle
test object 15: /tmp/regression-check/run-2009-10-20-0915/pyublasext
test object 16: /tmp/regression-check/run-2009-10-20-0915/quiet-beam-sampling
boostmpi/test/test_all_gather.py .
boostmpi/test/test_all_reduce.py .
boostmpi/test/test_all_to_all.py .
boostmpi/test/test_broadcast.py .
boostmpi/test/test_gather.py .
boostmpi/test/test_nonblocking.py
-------------- next part --------------
------------------------------------------------------------------
Regression check run
Tue Oct 20 09:15:01 EDT 2009
Host tuck
------------------------------------------------------------------
---------------------------------------------------------
cloning repotool
---------------------------------------------------------
------------------------------------------------------------------------
CLONE aksetup
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE jhbuild
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pytools
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pymbolic
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pyublas
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE boostmpi
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE meshpy
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pylo
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE codepy
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pycuda
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pyopencl
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pymetis
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE hedge
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pyrticle
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE pyublasext
------------------------------------------------------------------------
------------------------------------------------------------------------
CLONE quiet-beam-sampling
------------------------------------------------------------------------
New python executable in env/bin/python
Installing distribute...........................................................................................................................................................................................done.
Searching for py
Reading http://pypi.python.org/simple/py/
Reading http://codespeak.net/py
Reading http://pypi.python.org/simple/py/XXX
Reading http://pylib.org
Reading http://codespeak.net/py/0.9.2/download.html
Best match: py 1.0.2
Downloading http://pypi.python.org/packages/source/p/py/py-1.0.2.tar.gz#md5=4d2e9878b0113159fae2f3ed0cfc081d
Processing py-1.0.2.tar.gz
Running py-1.0.2/setup.py -q bdist_egg --dist-dir /tmp/easy_install-ek3-hE/py-1.0.2/egg-dist-tmp-jfInr0
warning: no files found matching 'CHANGELOG'
warning: no files found matching 'LICENSE'
warning: no previously-included files found matching '*.orig'
warning: no previously-included files found matching '*.rej'
no previously-included directories found matching '.svn'
no previously-included directories found matching '.hg'
Adding py 1.0.2 to easy-install.pth file
Installing py.lookup script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.countloc script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.rest script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.test script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.which script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.cleanup script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.svnwcrevert script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/py-1.0.2-py2.5.egg
Processing dependencies for py
Finished processing dependencies for py
------------------------------------------------------------------------
INSTALLING pytools
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pytools/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pytools/setuptools.pth
running install
running bdist_egg
running egg_info
creating pytools.egg-info
writing pytools.egg-info/PKG-INFO
writing top-level names to pytools.egg-info/top_level.txt
writing dependency_links to pytools.egg-info/dependency_links.txt
writing manifest file 'pytools.egg-info/SOURCES.txt'
reading manifest file 'pytools.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'pytools.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib
creating build/lib/pytools
copying pytools/__init__.py -> build/lib/pytools
copying pytools/runalyzer.py -> build/lib/pytools
copying pytools/test.py -> build/lib/pytools
copying pytools/datatable.py -> build/lib/pytools
copying pytools/mpi.py -> build/lib/pytools
copying pytools/batchjob.py -> build/lib/pytools
copying pytools/arithmetic_container.py -> build/lib/pytools
copying pytools/stopwatch.py -> build/lib/pytools
copying pytools/prefork.py -> build/lib/pytools
copying pytools/refdebug.py -> build/lib/pytools
copying pytools/grid.py -> build/lib/pytools
copying pytools/decorator.py -> build/lib/pytools
copying pytools/log.py -> build/lib/pytools
copying pytools/lex.py -> build/lib/pytools
copying pytools/diskdict.py -> build/lib/pytools
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/__init__.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/runalyzer.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/test.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/datatable.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/mpi.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/batchjob.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/arithmetic_container.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/stopwatch.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/prefork.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/refdebug.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/grid.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/decorator.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/log.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/lex.py -> build/bdist.linux-x86_64/egg/pytools
copying build/lib/pytools/diskdict.py -> build/bdist.linux-x86_64/egg/pytools
byte-compiling build/bdist.linux-x86_64/egg/pytools/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/runalyzer.py to runalyzer.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/test.py to test.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/datatable.py to datatable.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/mpi.py to mpi.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/batchjob.py to batchjob.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/arithmetic_container.py to arithmetic_container.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/stopwatch.py to stopwatch.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/prefork.py to prefork.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/refdebug.py to refdebug.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/grid.py to grid.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/decorator.py to decorator.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/log.py to log.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/lex.py to lex.pyc
byte-compiling build/bdist.linux-x86_64/egg/pytools/diskdict.py to diskdict.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
installing scripts to build/bdist.linux-x86_64/egg/EGG-INFO/scripts
running install_scripts
running build_scripts
creating build/scripts-2.5
copying and adjusting bin/logtool -> build/scripts-2.5
copying and adjusting bin/runalyzer-gather -> build/scripts-2.5
copying and adjusting bin/runalyzer -> build/scripts-2.5
changing mode of build/scripts-2.5/logtool from 644 to 755
changing mode of build/scripts-2.5/runalyzer-gather from 644 to 755
changing mode of build/scripts-2.5/runalyzer from 644 to 755
creating build/bdist.linux-x86_64/egg/EGG-INFO/scripts
copying build/scripts-2.5/runalyzer-gather -> build/bdist.linux-x86_64/egg/EGG-INFO/scripts
copying build/scripts-2.5/logtool -> build/bdist.linux-x86_64/egg/EGG-INFO/scripts
copying build/scripts-2.5/runalyzer -> build/bdist.linux-x86_64/egg/EGG-INFO/scripts
changing mode of build/bdist.linux-x86_64/egg/EGG-INFO/scripts/runalyzer-gather to 755
changing mode of build/bdist.linux-x86_64/egg/EGG-INFO/scripts/logtool to 755
changing mode of build/bdist.linux-x86_64/egg/EGG-INFO/scripts/runalyzer to 755
copying pytools.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pytools.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pytools.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pytools.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
zip_safe flag not set; analyzing archive contents...
pytools.diskdict: module references __file__
creating dist
creating 'dist/pytools-10-py2.5.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing pytools-10-py2.5.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pytools-10-py2.5.egg
Extracting pytools-10-py2.5.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding pytools 10 to easy-install.pth file
Installing runalyzer-gather script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing logtool script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing runalyzer script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pytools-10-py2.5.egg
Processing dependencies for pytools==10
Finished processing dependencies for pytools==10
------------------------------------------------------------------------
INSTALLING pymbolic
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pymbolic/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pymbolic/setuptools.pth
running install
running bdist_egg
running egg_info
creating pymbolic.egg-info
writing requirements to pymbolic.egg-info/requires.txt
writing pymbolic.egg-info/PKG-INFO
writing top-level names to pymbolic.egg-info/top_level.txt
writing dependency_links to pymbolic.egg-info/dependency_links.txt
writing manifest file 'pymbolic.egg-info/SOURCES.txt'
reading manifest file 'pymbolic.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'pymbolic.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib
creating build/lib/pymbolic
copying pymbolic/algorithm.py -> build/lib/pymbolic
copying pymbolic/rational.py -> build/lib/pymbolic
copying pymbolic/compiler.py -> build/lib/pymbolic
copying pymbolic/__init__.py -> build/lib/pymbolic
copying pymbolic/traits.py -> build/lib/pymbolic
copying pymbolic/polynomial.py -> build/lib/pymbolic
copying pymbolic/functions.py -> build/lib/pymbolic
copying pymbolic/parser.py -> build/lib/pymbolic
copying pymbolic/primitives.py -> build/lib/pymbolic
creating build/lib/pymbolic/mapper
copying pymbolic/mapper/__init__.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/collector.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/stringifier.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/flattener.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/differentiator.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/substitutor.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/constant_folder.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/c_code.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/evaluator.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/expander.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/dependency.py -> build/lib/pymbolic/mapper
copying pymbolic/mapper/flop_counter.py -> build/lib/pymbolic/mapper
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/algorithm.py -> build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/rational.py -> build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/compiler.py -> build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/__init__.py -> build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/traits.py -> build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/polynomial.py -> build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/functions.py -> build/bdist.linux-x86_64/egg/pymbolic
creating build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/__init__.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/collector.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/stringifier.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/flattener.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/differentiator.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/substitutor.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/constant_folder.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/c_code.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/evaluator.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/expander.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/dependency.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/mapper/flop_counter.py -> build/bdist.linux-x86_64/egg/pymbolic/mapper
copying build/lib/pymbolic/parser.py -> build/bdist.linux-x86_64/egg/pymbolic
copying build/lib/pymbolic/primitives.py -> build/bdist.linux-x86_64/egg/pymbolic
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/algorithm.py to algorithm.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/rational.py to rational.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/compiler.py to compiler.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/traits.py to traits.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/polynomial.py to polynomial.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/functions.py to functions.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/collector.py to collector.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/stringifier.py to stringifier.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/flattener.py to flattener.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/differentiator.py to differentiator.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/substitutor.py to substitutor.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/constant_folder.py to constant_folder.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/c_code.py to c_code.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/evaluator.py to evaluator.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/expander.py to expander.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/dependency.py to dependency.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/mapper/flop_counter.py to flop_counter.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/parser.py to parser.pyc
byte-compiling build/bdist.linux-x86_64/egg/pymbolic/primitives.py to primitives.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying pymbolic.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pymbolic.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pymbolic.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pymbolic.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pymbolic.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/pymbolic-0.91-py2.5.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing pymbolic-0.91-py2.5.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pymbolic-0.91-py2.5.egg
Extracting pymbolic-0.91-py2.5.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding pymbolic 0.91 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pymbolic-0.91-py2.5.egg
Processing dependencies for pymbolic==0.91
Searching for pytools==10
Best match: pytools 10
Processing pytools-10-py2.5.egg
pytools 10 is already the active version in easy-install.pth
Installing runalyzer-gather script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing logtool script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing runalyzer script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Using /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pytools-10-py2.5.egg
Finished processing dependencies for pymbolic==0.91
------------------------------------------------------------------------
INSTALLING pyublas
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pyublas/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pyublas/setuptools.pth
**************************************
**************************************
LD_LIBRARY_PATH
**************************************
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running install
running bdist_egg
running egg_info
creating PyUblas.egg-info
writing PyUblas.egg-info/PKG-INFO
writing top-level names to PyUblas.egg-info/top_level.txt
writing dependency_links to PyUblas.egg-info/dependency_links.txt
writing manifest file 'PyUblas.egg-info/SOURCES.txt'
reading manifest file 'PyUblas.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'PyUblas.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/pyublas
copying pyublas/__init__.py -> build/lib.linux-x86_64-2.5/pyublas
running build_ext
building '_internal' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/wrapper
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/wrapper/main.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/main.o -Wno-sign-compare
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/wrapper/converters.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/converters.o -Wno-sign-compare
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/wrapper/main.o build/temp.linux-x86_64-2.5/src/wrapper/converters.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -o build/lib.linux-x86_64-2.5/pyublas/_internal.so
building 'testhelp_ext' extension
creating build/temp.linux-x86_64-2.5/src/test
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/test/testhelp_ext.cpp -o build/temp.linux-x86_64-2.5/src/test/testhelp_ext.o -Wno-sign-compare
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/test/testhelp_ext.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -o build/lib.linux-x86_64-2.5/pyublas/testhelp_ext.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pyublas
copying build/lib.linux-x86_64-2.5/pyublas/__init__.py -> build/bdist.linux-x86_64/egg/pyublas
copying build/lib.linux-x86_64-2.5/pyublas/testhelp_ext.so -> build/bdist.linux-x86_64/egg/pyublas
copying build/lib.linux-x86_64-2.5/pyublas/_internal.so -> build/bdist.linux-x86_64/egg/pyublas
byte-compiling build/bdist.linux-x86_64/egg/pyublas/__init__.py to __init__.pyc
creating stub loader for pyublas/_internal.so
creating stub loader for pyublas/testhelp_ext.so
byte-compiling build/bdist.linux-x86_64/egg/pyublas/_internal.py to _internal.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyublas/testhelp_ext.py to testhelp_ext.pyc
installing package data to build/bdist.linux-x86_64/egg
running install_data
creating build/bdist.linux-x86_64/egg/include
creating build/bdist.linux-x86_64/egg/include/pyublas
copying src/cpp/pyublas/elementwise_op.hpp -> build/bdist.linux-x86_64/egg/include/pyublas
copying src/cpp/pyublas/numpy.hpp -> build/bdist.linux-x86_64/egg/include/pyublas
copying src/cpp/pyublas/generic_ublas.hpp -> build/bdist.linux-x86_64/egg/include/pyublas
copying src/cpp/pyublas/python_helpers.hpp -> build/bdist.linux-x86_64/egg/include/pyublas
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblas.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblas.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblas.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblas.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/PyUblas-0.93.1-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing PyUblas-0.93.1-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg
Extracting PyUblas-0.93.1-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding PyUblas 0.93.1 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg
Processing dependencies for PyUblas==0.93.1
Finished processing dependencies for PyUblas==0.93.1
------------------------------------------------------------------------
INSTALLING boostmpi
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/boostmpi/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/boostmpi/setuptools.pth
**************************************
**************************************
LD_LIBRARY_PATH
**************************************
**************************************
running install
running bdist_egg
running egg_info
creating boostmpi.egg-info
writing boostmpi.egg-info/PKG-INFO
writing top-level names to boostmpi.egg-info/top_level.txt
writing dependency_links to boostmpi.egg-info/dependency_links.txt
writing manifest file 'boostmpi.egg-info/SOURCES.txt'
reading manifest file 'boostmpi.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'boostmpi.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/boostmpi
copying boostmpi/__init__.py -> build/lib.linux-x86_64-2.5/boostmpi
copying boostmpi/extinit.py -> build/lib.linux-x86_64-2.5/boostmpi
copying boostmpi/autoinit.py -> build/lib.linux-x86_64-2.5/boostmpi
copying boostmpi/util.py -> build/lib.linux-x86_64-2.5/boostmpi
running build_ext
building '_internal' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/wrapper
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/py_nonblocking.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/py_nonblocking.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/py_exception.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/py_exception.o
src/wrapper/py_exception.cpp: In function 'void boost::mpi::python::export_exception()':
src/wrapper/py_exception.cpp:49: warning: deprecated conversion from string constant to 'char*'
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/py_timer.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/py_timer.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/documentation.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/documentation.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/status.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/status.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/py_request.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/py_request.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/skeleton_and_content.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/skeleton_and_content.o
src/wrapper/skeleton_and_content.cpp: In function 'void boost::mpi::python::export_skeleton_and_content(boost::python::class_<boost::mpi::python::py_communicator, boost::shared_ptr<boost::mpi::python::py_communicator>, boost::python::detail::not_specified, boost::python::detail::not_specified>&)':
src/wrapper/skeleton_and_content.cpp:150: warning: deprecated conversion from string constant to 'char*'
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/collectives.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/collectives.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/datatypes.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/datatypes.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/module.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/module.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/py_communicator.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/py_communicator.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/buffer_iface.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/buffer_iface.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/py_environment.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/py_environment.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/serialize.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/serialize.o
gcc -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/wrapper/py_nonblocking.o build/temp.linux-x86_64-2.5/src/wrapper/py_exception.o build/temp.linux-x86_64-2.5/src/wrapper/py_timer.o build/temp.linux-x86_64-2.5/src/wrapper/documentation.o build/temp.linux-x86_64-2.5/src/wrapper/status.o build/temp.linux-x86_64-2.5/src/wrapper/py_request.o build/temp.linux-x86_64-2.5/src/wrapper/skeleton_and_content.o build/temp.linux-x86_64-2.5/src/wrapper/collectives.o build/temp.linux-x86_64-2.5/src/wrapper/datatypes.o build/temp.linux-x86_64-2.5/src/wrapper/module.o build/temp.linux-x86_64-2.5/src/wrapper/py_communicator.o build/temp.linux-x86_64-2.5/src/wrapper/buffer_iface.o build/temp.linux-x86_64-2.5/src/wrapper/py_environment.o build/temp.linux-x86_64-2.5/src/wrapper/serialize.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -lboost_mpi-gcc43-mt -o build/lib.linux-x86_64-2.5/boostmpi/_internal.so
building 'skeleton_content_test' extension
creating build/temp.linux-x86_64-2.5/src/test
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DOMPI_SKIP_MPICXX=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/test/skeleton_content_test.cpp -o build/temp.linux-x86_64-2.5/src/test/skeleton_content_test.o
gcc -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/test/skeleton_content_test.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -lboost_mpi-gcc43-mt -o build/lib.linux-x86_64-2.5/boostmpi/skeleton_content_test.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/boostmpi
copying build/lib.linux-x86_64-2.5/boostmpi/__init__.py -> build/bdist.linux-x86_64/egg/boostmpi
copying build/lib.linux-x86_64-2.5/boostmpi/extinit.py -> build/bdist.linux-x86_64/egg/boostmpi
copying build/lib.linux-x86_64-2.5/boostmpi/autoinit.py -> build/bdist.linux-x86_64/egg/boostmpi
copying build/lib.linux-x86_64-2.5/boostmpi/util.py -> build/bdist.linux-x86_64/egg/boostmpi
copying build/lib.linux-x86_64-2.5/boostmpi/skeleton_content_test.so -> build/bdist.linux-x86_64/egg/boostmpi
copying build/lib.linux-x86_64-2.5/boostmpi/_internal.so -> build/bdist.linux-x86_64/egg/boostmpi
byte-compiling build/bdist.linux-x86_64/egg/boostmpi/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/boostmpi/extinit.py to extinit.pyc
byte-compiling build/bdist.linux-x86_64/egg/boostmpi/autoinit.py to autoinit.pyc
byte-compiling build/bdist.linux-x86_64/egg/boostmpi/util.py to util.pyc
creating stub loader for boostmpi/_internal.so
creating stub loader for boostmpi/skeleton_content_test.so
byte-compiling build/bdist.linux-x86_64/egg/boostmpi/_internal.py to _internal.pyc
byte-compiling build/bdist.linux-x86_64/egg/boostmpi/skeleton_content_test.py to skeleton_content_test.pyc
installing package data to build/bdist.linux-x86_64/egg
running install_data
creating build/bdist.linux-x86_64/egg/include
creating build/bdist.linux-x86_64/egg/include/boostmpi
copying src/cpp/boostmpi/serialize.hpp -> build/bdist.linux-x86_64/egg/include/boostmpi
copying src/cpp/boostmpi/config.hpp -> build/bdist.linux-x86_64/egg/include/boostmpi
copying src/cpp/boostmpi/environment.hpp -> build/bdist.linux-x86_64/egg/include/boostmpi
copying src/cpp/boostmpi/skeleton_and_content.hpp -> build/bdist.linux-x86_64/egg/include/boostmpi
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying boostmpi.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying boostmpi.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying boostmpi.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying boostmpi.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/boostmpi-1.39-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing boostmpi-1.39-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/boostmpi-1.39-py2.5-linux-x86_64.egg
Extracting boostmpi-1.39-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding boostmpi 1.39 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/boostmpi-1.39-py2.5-linux-x86_64.egg
Processing dependencies for boostmpi==1.39
Finished processing dependencies for boostmpi==1.39
------------------------------------------------------------------------
INSTALLING meshpy
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/meshpy/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/meshpy/setuptools.pth
**************************************
**************************************
LD_LIBRARY_PATH
**************************************
**************************************
running install
running bdist_egg
running egg_info
creating MeshPy.egg-info
writing MeshPy.egg-info/PKG-INFO
writing top-level names to MeshPy.egg-info/top_level.txt
writing dependency_links to MeshPy.egg-info/dependency_links.txt
writing manifest file 'MeshPy.egg-info/SOURCES.txt'
reading manifest file 'MeshPy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'MeshPy.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/meshpy
copying meshpy/__init__.py -> build/lib.linux-x86_64-2.5/meshpy
copying meshpy/tools.py -> build/lib.linux-x86_64-2.5/meshpy
copying meshpy/naca.py -> build/lib.linux-x86_64-2.5/meshpy
copying meshpy/tet.py -> build/lib.linux-x86_64-2.5/meshpy
copying meshpy/geometry.py -> build/lib.linux-x86_64-2.5/meshpy
copying meshpy/triangle.py -> build/lib.linux-x86_64-2.5/meshpy
copying meshpy/common.py -> build/lib.linux-x86_64-2.5/meshpy
copying meshpy/ply.py -> build/lib.linux-x86_64-2.5/meshpy
running build_ext
building 'meshpy._triangle' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/cpp
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DEXTERNAL_TEST=1 -DANSI_DECLARATORS=1 -DTRILIBRARY=1 -I/home/andreas/pool/include/boost-1_39 -Isrc/cpp -I/usr/include/python2.5 -c src/cpp/wrap_triangle.cpp -o build/temp.linux-x86_64-2.5/src/cpp/wrap_triangle.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DEXTERNAL_TEST=1 -DANSI_DECLARATORS=1 -DTRILIBRARY=1 -I/home/andreas/pool/include/boost-1_39 -Isrc/cpp -I/usr/include/python2.5 -c src/cpp/triangle.c -o build/temp.linux-x86_64-2.5/src/cpp/triangle.o
src/cpp/triangle.c:4886: warning: 'previous_cword' defined but not used
src/cpp/triangle.c: In function 'incircleadapt':
src/cpp/triangle.c:5368: warning: 'axtbclen' may be used uninitialized in this function
src/cpp/triangle.c:5368: warning: 'aytbclen' may be used uninitialized in this function
src/cpp/triangle.c:5368: warning: 'bxtcalen' may be used uninitialized in this function
src/cpp/triangle.c:5368: warning: 'bytcalen' may be used uninitialized in this function
src/cpp/triangle.c:5368: warning: 'cxtablen' may be used uninitialized in this function
src/cpp/triangle.c:5368: warning: 'cytablen' may be used uninitialized in this function
src/cpp/triangle.c: In function 'insertvertex':
src/cpp/triangle.c:8231: warning: 'toprcasing.orient' may be used uninitialized in this function
src/cpp/triangle.c:8231: warning: 'toprcasing.tri' may be used uninitialized in this function
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/cpp/wrap_triangle.o build/temp.linux-x86_64-2.5/src/cpp/triangle.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -o build/lib.linux-x86_64-2.5/meshpy/_triangle.so
building 'meshpy._tetgen' extension
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DTETLIBRARY=1 -DSELF_CHECK=1 -I/home/andreas/pool/include/boost-1_39 -Isrc/cpp -I/usr/include/python2.5 -c src/cpp/tetgen.cpp -o build/temp.linux-x86_64-2.5/src/cpp/tetgen.o
src/cpp/tetgen.cpp: In member function 'void tetgenio::deinitialize()':
src/cpp/tetgen.cpp:180: warning: unused variable 'f'
src/cpp/tetgen.cpp:181: warning: unused variable 'p'
src/cpp/tetgen.cpp:182: warning: unused variable 'pg'
src/cpp/tetgen.cpp:183: warning: unused variable 'j'
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::constrainedfacets()':
src/cpp/tetgen.cpp:23169: warning: deprecated conversion from string constant to 'char*'
src/cpp/tetgen.cpp:23174: warning: deprecated conversion from string constant to 'char*'
src/cpp/tetgen.cpp:23175: warning: deprecated conversion from string constant to 'char*'
src/cpp/tetgen.cpp:23176: warning: deprecated conversion from string constant to 'char*'
src/cpp/tetgen.cpp: In member function 'long int tetgenmesh::reconstructmesh()':
src/cpp/tetgen.cpp:27141: warning: deprecated conversion from string constant to 'char*'
src/cpp/tetgen.cpp: In member function 'bool tetgenmesh::smoothpoint(double*, double*, double*, tetgenmesh::list*, bool, double*)':
src/cpp/tetgen.cpp:26166: warning: 'aspTmax' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::outfaces(tetgenio*)':
src/cpp/tetgen.cpp:31594: warning: 'neigh2' may be used uninitialized in this function
src/cpp/tetgen.cpp:31594: warning: 'neigh1' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::carvecavity(tetgenmesh::list*, tetgenmesh::list*, tetgenmesh::queue*)':
src/cpp/tetgen.cpp:4479: warning: array subscript is above array bounds
src/cpp/tetgen.cpp: In member function 'bool tetgenio::load_node(char*)':
src/cpp/tetgen.cpp:409: warning: 'markers' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'bool tetgenio::load_tetmesh(char*)':
src/cpp/tetgen.cpp:2030: warning: 'markers' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::outmetrics(tetgenio*)':
src/cpp/tetgen.cpp:31312: warning: 'lave' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::decidefeaturepointsizes()':
src/cpp/tetgen.cpp:27936: warning: 'maxlen' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::outvoronoi(tetgenio*)':
src/cpp/tetgen.cpp:32367: warning: 'vedge' may be used uninitialized in this function
src/cpp/tetgen.cpp:32368: warning: 'vfacet' may be used uninitialized in this function
src/cpp/tetgen.cpp:32379: warning: 'k' may be used uninitialized in this function
src/cpp/tetgen.cpp:32375: warning: 'vertarray' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'bool tetgenmesh::checktet4opt(tetgenmesh::triface*, bool)':
src/cpp/tetgen.cpp:30135: warning: 'cosd' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'bool tetgenmesh::removeedgebytranNM(double*, int, tetgenmesh::triface*, tetgenmesh::triface*, double*, double*, tetgenmesh::queue*)':
src/cpp/tetgen.cpp:12188: warning: 'cosmaxd' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'bool tetgenmesh::removefacebyflip23(double*, tetgenmesh::triface*, tetgenmesh::triface*, tetgenmesh::queue*)':
src/cpp/tetgen.cpp:11884: warning: 'cosmaxd' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'bool tetgenmesh::removeedgebyflip22(double*, int, tetgenmesh::triface*, tetgenmesh::queue*)':
src/cpp/tetgen.cpp:11822: warning: 'pf' may be used uninitialized in this function
src/cpp/tetgen.cpp:11823: warning: 'cosmaxd' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::bowatinsertsite(double*, tetgenmesh::face*, int, tetgenmesh::list**, tetgenmesh::list**, tetgenmesh::list**, tetgenmesh::list**, tetgenmesh::list*, tetgenmesh::queue*, bool, bool, bool)':
src/cpp/tetgen.cpp:15834: warning: 'pbsegshs' may be used uninitialized in this function
src/cpp/tetgen.cpp:15834: warning: 'apsegshs' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::optimizemesh(bool)':
src/cpp/tetgen.cpp:30657: warning: 'objdihed' may be used uninitialized in this function
src/cpp/tetgen.cpp: In member function 'void tetgenmesh::repairencsegs(bool, bool)':
src/cpp/tetgen.cpp:29368: warning: 'flipque' may be used uninitialized in this function
src/cpp/tetgen.cpp:29367: warning: 'sublist' may be used uninitialized in this function
src/cpp/tetgen.cpp:29367: warning: 'tetlist' may be used uninitialized in this function
src/cpp/tetgen.cpp:29366: warning: 'subceillists' may be used uninitialized in this function
src/cpp/tetgen.cpp:29366: warning: 'sublists' may be used uninitialized in this function
src/cpp/tetgen.cpp:29365: warning: 'ceillists' may be used uninitialized in this function
src/cpp/tetgen.cpp:29365: warning: 'tetlists' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DTETLIBRARY=1 -DSELF_CHECK=1 -I/home/andreas/pool/include/boost-1_39 -Isrc/cpp -I/usr/include/python2.5 -c src/cpp/predicates.cpp -o build/temp.linux-x86_64-2.5/src/cpp/predicates.o
src/cpp/predicates.cpp: In function 'double incircleadapt(double*, double*, double*, double*, double)':
src/cpp/predicates.cpp:2666: warning: 'axtbclen' may be used uninitialized in this function
src/cpp/predicates.cpp:2666: warning: 'aytbclen' may be used uninitialized in this function
src/cpp/predicates.cpp:2666: warning: 'bxtcalen' may be used uninitialized in this function
src/cpp/predicates.cpp:2666: warning: 'bytcalen' may be used uninitialized in this function
src/cpp/predicates.cpp:2666: warning: 'cxtablen' may be used uninitialized in this function
src/cpp/predicates.cpp:2666: warning: 'cytablen' may be used uninitialized in this function
src/cpp/predicates.cpp: At global scope:
src/cpp/predicates.cpp:667: warning: 'previous_cword' defined but not used
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DTETLIBRARY=1 -DSELF_CHECK=1 -I/home/andreas/pool/include/boost-1_39 -Isrc/cpp -I/usr/include/python2.5 -c src/cpp/wrap_tetgen.cpp -o build/temp.linux-x86_64-2.5/src/cpp/wrap_tetgen.o
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/cpp/tetgen.o build/temp.linux-x86_64-2.5/src/cpp/predicates.o build/temp.linux-x86_64-2.5/src/cpp/wrap_tetgen.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -o build/lib.linux-x86_64-2.5/meshpy/_tetgen.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/__init__.py -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/tools.py -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/naca.py -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/tet.py -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/geometry.py -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/triangle.py -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/_triangle.so -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/_tetgen.so -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/common.py -> build/bdist.linux-x86_64/egg/meshpy
copying build/lib.linux-x86_64-2.5/meshpy/ply.py -> build/bdist.linux-x86_64/egg/meshpy
byte-compiling build/bdist.linux-x86_64/egg/meshpy/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/tools.py to tools.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/naca.py to naca.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/tet.py to tet.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/geometry.py to geometry.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/triangle.py to triangle.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/common.py to common.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/ply.py to ply.pyc
creating stub loader for meshpy/_triangle.so
creating stub loader for meshpy/_tetgen.so
byte-compiling build/bdist.linux-x86_64/egg/meshpy/_triangle.py to _triangle.pyc
byte-compiling build/bdist.linux-x86_64/egg/meshpy/_tetgen.py to _tetgen.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying MeshPy.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying MeshPy.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying MeshPy.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying MeshPy.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/MeshPy-0.91.1-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing MeshPy-0.91.1-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/MeshPy-0.91.1-py2.5-linux-x86_64.egg
Extracting MeshPy-0.91.1-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding MeshPy 0.91.1 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/MeshPy-0.91.1-py2.5-linux-x86_64.egg
Processing dependencies for MeshPy==0.91.1
Finished processing dependencies for MeshPy==0.91.1
------------------------------------------------------------------------
INSTALLING pylo
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pylo/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pylo/setuptools.pth
**************************************
**************************************
LD_LIBRARY_PATH
**************************************
**************************************
running install
running bdist_egg
running egg_info
creating pylo.egg-info
writing requirements to pylo.egg-info/requires.txt
writing pylo.egg-info/PKG-INFO
writing top-level names to pylo.egg-info/top_level.txt
writing dependency_links to pylo.egg-info/dependency_links.txt
writing manifest file 'pylo.egg-info/SOURCES.txt'
reading manifest file 'pylo.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'pylo.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/pylo
copying pylo/__init__.py -> build/lib.linux-x86_64-2.5/pylo
running build_ext
building '_internal' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/wrapper
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_SILO=1 -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/pool/include -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/wrap_silo.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_silo.o
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/wrapper/wrap_silo.o -L/home/andreas/pool/lib -L/home/andreas/pool/lib -lboost_python-gcc43-mt -lsilo -o build/lib.linux-x86_64-2.5/pylo/_internal.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pylo
copying build/lib.linux-x86_64-2.5/pylo/__init__.py -> build/bdist.linux-x86_64/egg/pylo
copying build/lib.linux-x86_64-2.5/pylo/_internal.so -> build/bdist.linux-x86_64/egg/pylo
byte-compiling build/bdist.linux-x86_64/egg/pylo/__init__.py to __init__.pyc
creating stub loader for pylo/_internal.so
byte-compiling build/bdist.linux-x86_64/egg/pylo/_internal.py to _internal.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying pylo.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pylo.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pylo.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pylo.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pylo.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/pylo-0.91.1-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing pylo-0.91.1-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pylo-0.91.1-py2.5-linux-x86_64.egg
Extracting pylo-0.91.1-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding pylo 0.91.1 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pylo-0.91.1-py2.5-linux-x86_64.egg
Processing dependencies for pylo==0.91.1
Searching for PyUblas==0.93.1
Best match: PyUblas 0.93.1
Processing PyUblas-0.93.1-py2.5-linux-x86_64.egg
PyUblas 0.93.1 is already the active version in easy-install.pth
Using /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg
Finished processing dependencies for pylo==0.91.1
------------------------------------------------------------------------
INSTALLING codepy
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/codepy/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/codepy/setuptools.pth
running install
running bdist_egg
running egg_info
creating codepy.egg-info
writing requirements to codepy.egg-info/requires.txt
writing codepy.egg-info/PKG-INFO
writing top-level names to codepy.egg-info/top_level.txt
writing dependency_links to codepy.egg-info/dependency_links.txt
writing manifest file 'codepy.egg-info/SOURCES.txt'
reading manifest file 'codepy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'Makefile.in'
writing manifest file 'codepy.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib
creating build/lib/codepy
copying codepy/__init__.py -> build/lib/codepy
copying codepy/jit.py -> build/lib/codepy
copying codepy/bpl.py -> build/lib/codepy
copying codepy/libraries.py -> build/lib/codepy
copying codepy/elementwise.py -> build/lib/codepy
creating build/lib/codepy/cgen
copying codepy/cgen/__init__.py -> build/lib/codepy/cgen
copying codepy/cgen/opencl.py -> build/lib/codepy/cgen
copying codepy/cgen/cuda.py -> build/lib/codepy/cgen
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/codepy
copying build/lib/codepy/__init__.py -> build/bdist.linux-x86_64/egg/codepy
copying build/lib/codepy/jit.py -> build/bdist.linux-x86_64/egg/codepy
copying build/lib/codepy/bpl.py -> build/bdist.linux-x86_64/egg/codepy
copying build/lib/codepy/libraries.py -> build/bdist.linux-x86_64/egg/codepy
creating build/bdist.linux-x86_64/egg/codepy/cgen
copying build/lib/codepy/cgen/__init__.py -> build/bdist.linux-x86_64/egg/codepy/cgen
copying build/lib/codepy/cgen/opencl.py -> build/bdist.linux-x86_64/egg/codepy/cgen
copying build/lib/codepy/cgen/cuda.py -> build/bdist.linux-x86_64/egg/codepy/cgen
copying build/lib/codepy/elementwise.py -> build/bdist.linux-x86_64/egg/codepy
byte-compiling build/bdist.linux-x86_64/egg/codepy/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/codepy/jit.py to jit.pyc
byte-compiling build/bdist.linux-x86_64/egg/codepy/bpl.py to bpl.pyc
byte-compiling build/bdist.linux-x86_64/egg/codepy/libraries.py to libraries.pyc
byte-compiling build/bdist.linux-x86_64/egg/codepy/cgen/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/codepy/cgen/opencl.py to opencl.pyc
byte-compiling build/bdist.linux-x86_64/egg/codepy/cgen/cuda.py to cuda.pyc
byte-compiling build/bdist.linux-x86_64/egg/codepy/elementwise.py to elementwise.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying codepy.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying codepy.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying codepy.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying codepy.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying codepy.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/codepy-0.91-py2.5.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing codepy-0.91-py2.5.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/codepy-0.91-py2.5.egg
Extracting codepy-0.91-py2.5.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding codepy 0.91 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/codepy-0.91-py2.5.egg
Processing dependencies for codepy==0.91
Searching for pytools==10
Best match: pytools 10
Processing pytools-10-py2.5.egg
pytools 10 is already the active version in easy-install.pth
Installing runalyzer-gather script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing logtool script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing runalyzer script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Using /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pytools-10-py2.5.egg
Finished processing dependencies for codepy==0.91
------------------------------------------------------------------------
INSTALLING pycuda
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pycuda/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pycuda/setuptools.pth
**************************************
**************************************
LD_LIBRARY_PATH
**************************************
**************************************
/home/andreas/pool/include/boost-1_39 /boost/ python .hpp
/home/andreas/pool/lib / lib boost_python-gcc43-mt .so
/home/andreas/pool/lib / lib boost_thread-gcc43-mt .so
/home/andreas/pool/cuda /bin/ nvcc
/home/andreas/pool/cuda/include / cuda .h
/home/andreas/pool/cuda/lib / lib cuda .so
/home/andreas/pool/cuda/lib / lib cuda .dylib
/home/andreas/pool/cuda/lib / lib cuda .lib
/home/andreas/pool/cuda/lib / cuda .so
/home/andreas/pool/cuda/lib / cuda .dylib
/home/andreas/pool/cuda/lib / cuda .lib
/home/andreas/pool/cuda/lib / cuda .so
/home/andreas/pool/cuda/lib / cuda .dylib
/home/andreas/pool/cuda/lib / cuda .lib
/home/andreas/pool/cuda/lib / cuda .so
/home/andreas/pool/cuda/lib / cuda .dylib
/home/andreas/pool/cuda/lib / cuda .lib
*** Cannot find CUDA driver library. Checked locations:
/home/andreas/pool/cuda/lib/libcuda.so
/home/andreas/pool/cuda/lib/libcuda.dylib
/home/andreas/pool/cuda/lib/libcuda.lib
/home/andreas/pool/cuda/lib/cuda.so
/home/andreas/pool/cuda/lib/cuda.dylib
/home/andreas/pool/cuda/lib/cuda.lib
/home/andreas/pool/cuda/lib/cuda.so
/home/andreas/pool/cuda/lib/cuda.dylib
/home/andreas/pool/cuda/lib/cuda.lib
/home/andreas/pool/cuda/lib/cuda.so
/home/andreas/pool/cuda/lib/cuda.dylib
/home/andreas/pool/cuda/lib/cuda.lib
*** Note that this may not be a problem as this component is often installed system-wide.
running install
running bdist_egg
running egg_info
creating pycuda.egg-info
writing requirements to pycuda.egg-info/requires.txt
writing pycuda.egg-info/PKG-INFO
writing top-level names to pycuda.egg-info/top_level.txt
writing dependency_links to pycuda.egg-info/dependency_links.txt
writing manifest file 'pycuda.egg-info/SOURCES.txt'
reading manifest file 'pycuda.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'pycuda.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/pycuda
copying pycuda/compiler.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/__init__.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/tools.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/curandom.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/gpuarray.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/reduction.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/driver.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/autoinit.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/cumath.py -> build/lib.linux-x86_64-2.5/pycuda
copying pycuda/elementwise.py -> build/lib.linux-x86_64-2.5/pycuda
creating build/lib.linux-x86_64-2.5/pycuda/gl
copying pycuda/gl/__init__.py -> build/lib.linux-x86_64-2.5/pycuda/gl
copying pycuda/gl/autoinit.py -> build/lib.linux-x86_64-2.5/pycuda/gl
running build_ext
building '_driver' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/cpp
creating build/temp.linux-x86_64-2.5/src/wrapper
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/pool/cuda/include -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/cpp/cuda.cpp -o build/temp.linux-x86_64-2.5/src/cpp/cuda.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/pool/cuda/include -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/cpp/bitlog.cpp -o build/temp.linux-x86_64-2.5/src/cpp/bitlog.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/pool/cuda/include -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/wrapper/wrap_cudadrv.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_cudadrv.o
src/wrapper/wrap_cudadrv.cpp: In function 'void init_module__driver()':
src/wrapper/wrap_cudadrv.cpp:439: warning: deprecated conversion from string constant to 'char*'
src/wrapper/wrap_cudadrv.cpp:443: warning: deprecated conversion from string constant to 'char*'
src/wrapper/wrap_cudadrv.cpp:444: warning: deprecated conversion from string constant to 'char*'
src/wrapper/wrap_cudadrv.cpp:445: warning: deprecated conversion from string constant to 'char*'
src/wrapper/wrap_cudadrv.cpp:446: warning: deprecated conversion from string constant to 'char*'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/pool/cuda/include -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/wrapper/mempool.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/mempool.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/pool/cuda/include -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/wrapper/wrap_cudagl.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_cudagl.o
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/cpp/cuda.o build/temp.linux-x86_64-2.5/src/cpp/bitlog.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_cudadrv.o build/temp.linux-x86_64-2.5/src/wrapper/mempool.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_cudagl.o -L/home/andreas/pool/lib -L/home/andreas/pool/cuda/lib -lboost_python-gcc43-mt -lboost_thread-gcc43-mt -lcuda -o build/lib.linux-x86_64-2.5/pycuda/_driver.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/_driver.so -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/compiler.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/__init__.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/tools.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/curandom.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/gpuarray.py -> build/bdist.linux-x86_64/egg/pycuda
creating build/bdist.linux-x86_64/egg/pycuda/gl
copying build/lib.linux-x86_64-2.5/pycuda/gl/__init__.py -> build/bdist.linux-x86_64/egg/pycuda/gl
copying build/lib.linux-x86_64-2.5/pycuda/gl/autoinit.py -> build/bdist.linux-x86_64/egg/pycuda/gl
copying build/lib.linux-x86_64-2.5/pycuda/reduction.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/driver.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/autoinit.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/cumath.py -> build/bdist.linux-x86_64/egg/pycuda
copying build/lib.linux-x86_64-2.5/pycuda/elementwise.py -> build/bdist.linux-x86_64/egg/pycuda
byte-compiling build/bdist.linux-x86_64/egg/pycuda/compiler.py to compiler.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/tools.py to tools.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/curandom.py to curandom.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/gpuarray.py to gpuarray.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/gl/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/gl/autoinit.py to autoinit.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/reduction.py to reduction.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/driver.py to driver.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/autoinit.py to autoinit.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/cumath.py to cumath.pyc
byte-compiling build/bdist.linux-x86_64/egg/pycuda/elementwise.py to elementwise.pyc
creating stub loader for pycuda/_driver.so
byte-compiling build/bdist.linux-x86_64/egg/pycuda/_driver.py to _driver.pyc
installing package data to build/bdist.linux-x86_64/egg
running install_data
creating build/bdist.linux-x86_64/egg/include
creating build/bdist.linux-x86_64/egg/include/pycuda
copying src/cuda/pycuda-helpers.hpp -> build/bdist.linux-x86_64/egg/include/pycuda
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying pycuda.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pycuda.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pycuda.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pycuda.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pycuda.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing pycuda-0.93.1rc1-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg
Extracting pycuda-0.93.1rc1-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding pycuda 0.93.1rc1 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pycuda-0.93.1rc1-py2.5-linux-x86_64.egg
Processing dependencies for pycuda==0.93.1rc1
Searching for pytools==10
Best match: pytools 10
Processing pytools-10-py2.5.egg
pytools 10 is already the active version in easy-install.pth
Installing runalyzer-gather script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing logtool script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing runalyzer script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Using /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pytools-10-py2.5.egg
Finished processing dependencies for pycuda==0.93.1rc1
------------------------------------------------------------------------
INSTALLING pyopencl
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pyopencl/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pyopencl/setuptools.pth
**************************************
**************************************
LD_LIBRARY_PATH
**************************************
**************************************
running install
running bdist_egg
running egg_info
creating pyopencl.egg-info
writing requirements to pyopencl.egg-info/requires.txt
writing pyopencl.egg-info/PKG-INFO
writing top-level names to pyopencl.egg-info/top_level.txt
writing dependency_links to pyopencl.egg-info/dependency_links.txt
writing manifest file 'pyopencl.egg-info/SOURCES.txt'
reading manifest file 'pyopencl.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'src/cl/*.hpp'
writing manifest file 'pyopencl.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/pyopencl
copying pyopencl/__init__.py -> build/lib.linux-x86_64-2.5/pyopencl
copying pyopencl/version.py -> build/lib.linux-x86_64-2.5/pyopencl
running build_ext
building '_cl' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/wrapper
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c src/wrapper/wrap_cl.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_cl.o
src/wrapper/wrap_cl.cpp: In function 'void init_module__cl()':
src/wrapper/wrap_cl.cpp:83: warning: deprecated conversion from string constant to 'char*'
src/wrapper/wrap_cl.cpp:87: warning: deprecated conversion from string constant to 'char*'
src/wrapper/wrap_cl.cpp:88: warning: deprecated conversion from string constant to 'char*'
src/wrapper/wrap_cl.cpp:89: warning: deprecated conversion from string constant to 'char*'
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/wrapper/wrap_cl.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -lboost_thread-gcc43-mt -lOpenCL -o build/lib.linux-x86_64-2.5/pyopencl/_cl.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pyopencl
copying build/lib.linux-x86_64-2.5/pyopencl/__init__.py -> build/bdist.linux-x86_64/egg/pyopencl
copying build/lib.linux-x86_64-2.5/pyopencl/version.py -> build/bdist.linux-x86_64/egg/pyopencl
copying build/lib.linux-x86_64-2.5/pyopencl/_cl.so -> build/bdist.linux-x86_64/egg/pyopencl
byte-compiling build/bdist.linux-x86_64/egg/pyopencl/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyopencl/version.py to version.pyc
creating stub loader for pyopencl/_cl.so
byte-compiling build/bdist.linux-x86_64/egg/pyopencl/_cl.py to _cl.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying pyopencl.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pyopencl.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pyopencl.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pyopencl.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pyopencl.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/pyopencl-0.91.3-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing pyopencl-0.91.3-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pyopencl-0.91.3-py2.5-linux-x86_64.egg
Extracting pyopencl-0.91.3-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding pyopencl 0.91.3 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pyopencl-0.91.3-py2.5-linux-x86_64.egg
Processing dependencies for pyopencl==0.91.3
Searching for py==1.0.2
Best match: py 1.0.2
Processing py-1.0.2-py2.5.egg
py 1.0.2 is already the active version in easy-install.pth
Installing py.lookup script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.countloc script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.rest script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.test script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.which script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.cleanup script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing py.svnwcrevert script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Using /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/py-1.0.2-py2.5.egg
Searching for pytools==10
Best match: pytools 10
Processing pytools-10-py2.5.egg
pytools 10 is already the active version in easy-install.pth
Installing runalyzer-gather script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing logtool script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Installing runalyzer script to /tmp/regression-check/run-2009-10-20-0915/env/bin
Using /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pytools-10-py2.5.egg
Finished processing dependencies for pyopencl==0.91.3
------------------------------------------------------------------------
INSTALLING pymetis
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pymetis/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pymetis/setuptools.pth
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LD_LIBRARY_PATH
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running install
running bdist_egg
running egg_info
creating PyMetis.egg-info
writing PyMetis.egg-info/PKG-INFO
writing top-level names to PyMetis.egg-info/top_level.txt
writing dependency_links to PyMetis.egg-info/dependency_links.txt
writing manifest file 'PyMetis.egg-info/SOURCES.txt'
reading manifest file 'PyMetis.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'PyMetis.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/pymetis
copying pymetis/__init__.py -> build/lib.linux-x86_64-2.5/pymetis
running build_ext
building 'pymetis._internal' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/gklib
creating build/temp.linux-x86_64-2.5/src/metis
creating build/temp.linux-x86_64-2.5/src/wrapper
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/timers.c -o build/temp.linux-x86_64-2.5/src/gklib/timers.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/blas.c -o build/temp.linux-x86_64-2.5/src/gklib/blas.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/memory.c -o build/temp.linux-x86_64-2.5/src/gklib/memory.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/error.c -o build/temp.linux-x86_64-2.5/src/gklib/error.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/dlmalloc.c -o build/temp.linux-x86_64-2.5/src/gklib/dlmalloc.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/getopt.c -o build/temp.linux-x86_64-2.5/src/gklib/getopt.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/b64.c -o build/temp.linux-x86_64-2.5/src/gklib/b64.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/util.c -o build/temp.linux-x86_64-2.5/src/gklib/util.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/pqueue.c -o build/temp.linux-x86_64-2.5/src/gklib/pqueue.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/tokenizer.c -o build/temp.linux-x86_64-2.5/src/gklib/tokenizer.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/pdb.c -o build/temp.linux-x86_64-2.5/src/gklib/pdb.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/fs.c -o build/temp.linux-x86_64-2.5/src/gklib/fs.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/dfkvkselect.c -o build/temp.linux-x86_64-2.5/src/gklib/dfkvkselect.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/omp.c -o build/temp.linux-x86_64-2.5/src/gklib/omp.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/sort.c -o build/temp.linux-x86_64-2.5/src/gklib/sort.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/io.c -o build/temp.linux-x86_64-2.5/src/gklib/io.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/string.c -o build/temp.linux-x86_64-2.5/src/gklib/string.o
src/gklib/string.c: In function 'gk_str2time':
src/gklib/string.c:472: warning: implicit declaration of function 'strptime'
src/gklib/string.c:472: warning: comparison between pointer and integer
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/htable.c -o build/temp.linux-x86_64-2.5/src/gklib/htable.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/gklib/seq.c -o build/temp.linux-x86_64-2.5/src/gklib/seq.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/minitpart2.c -o build/temp.linux-x86_64-2.5/src/metis/minitpart2.o
src/metis/minitpart2.c: In function 'libmetis__MocGrowBisection2':
src/metis/minitpart2.c:85: warning: value computed is not used
src/metis/minitpart2.c:92: warning: value computed is not used
src/metis/minitpart2.c:59: warning: unused variable 'mincut'
src/metis/minitpart2.c:59: warning: unused variable 'from'
src/metis/minitpart2.c:59: warning: unused variable 'ncon'
src/metis/minitpart2.c:59: warning: unused variable 'k'
src/metis/minitpart2.c:59: warning: unused variable 'j'
src/metis/minitpart2.c:59: warning: unused variable 'i'
src/metis/minitpart2.c: In function 'libmetis__MocGrowBisectionNew2':
src/metis/minitpart2.c:132: warning: value computed is not used
src/metis/minitpart2.c:139: warning: value computed is not used
src/metis/minitpart2.c:109: warning: unused variable 'mincut'
src/metis/minitpart2.c:109: warning: unused variable 'from'
src/metis/minitpart2.c:109: warning: unused variable 'ncon'
src/metis/minitpart2.c:109: warning: unused variable 'k'
src/metis/minitpart2.c:109: warning: unused variable 'j'
src/metis/minitpart2.c:109: warning: unused variable 'i'
src/metis/minitpart2.c: In function 'libmetis__MocInit2WayBalance2':
src/metis/minitpart2.c:156: warning: unused variable 'me'
src/metis/minitpart2.c:156: warning: unused variable 'pass'
src/metis/minitpart2.c: In function 'libmetis__SelectQueueOneWay2':
src/metis/minitpart2.c:330: warning: 'imax' may be used uninitialized in this function
src/metis/minitpart2.c: In function 'libmetis__MocGrowBisectionNew2':
src/metis/minitpart2.c:109: warning: 'bestcut' may be used uninitialized in this function
src/metis/minitpart2.c: In function 'libmetis__MocGrowBisection2':
src/metis/minitpart2.c:59: warning: 'bestcut' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/minitpart.c -o build/temp.linux-x86_64-2.5/src/metis/minitpart.o
src/metis/minitpart.c: In function 'libmetis__MocInit2WayPartition':
src/metis/minitpart.c:23: warning: unused variable 'i'
src/metis/minitpart.c: In function 'libmetis__MocGrowBisection':
src/metis/minitpart.c:88: warning: value computed is not used
src/metis/minitpart.c:95: warning: value computed is not used
src/metis/minitpart.c:62: warning: unused variable 'mincut'
src/metis/minitpart.c:62: warning: unused variable 'from'
src/metis/minitpart.c:62: warning: unused variable 'ncon'
src/metis/minitpart.c:62: warning: unused variable 'k'
src/metis/minitpart.c:62: warning: unused variable 'j'
src/metis/minitpart.c:62: warning: unused variable 'i'
src/metis/minitpart.c: In function 'libmetis__MocRandomBisection':
src/metis/minitpart.c:156: warning: value computed is not used
src/metis/minitpart.c:163: warning: value computed is not used
src/metis/minitpart.c:109: warning: unused variable 'mincut'
src/metis/minitpart.c:109: warning: unused variable 'from'
src/metis/minitpart.c:109: warning: unused variable 'k'
src/metis/minitpart.c:109: warning: unused variable 'j'
src/metis/minitpart.c: In function 'libmetis__MocInit2WayBalance':
src/metis/minitpart.c:181: warning: unused variable 'me'
src/metis/minitpart.c:181: warning: unused variable 'pass'
src/metis/minitpart.c: In function 'libmetis__MocRandomBisection':
src/metis/minitpart.c:109: warning: 'bestcut' may be used uninitialized in this function
src/metis/minitpart.c: In function 'libmetis__MocGrowBisection':
src/metis/minitpart.c:62: warning: 'bestcut' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/parmetis.c -o build/temp.linux-x86_64-2.5/src/metis/parmetis.o
src/metis/parmetis.c: In function 'METIS_WPartGraphKway2':
src/metis/parmetis.c:48: warning: unused variable 'j'
src/metis/parmetis.c:48: warning: unused variable 'i'
src/metis/parmetis.c: In function 'METIS_NodeNDP':
src/metis/parmetis.c:98: warning: unused variable 'nflag'
src/metis/parmetis.c:98: warning: unused variable 'wflag'
src/metis/parmetis.c: In function 'libmetis__MlevelNestedDissectionP':
src/metis/parmetis.c:196: warning: unused variable 'j'
src/metis/parmetis.c: In function 'METIS_NodeComputeSeparator':
src/metis/parmetis.c:305: warning: value computed is not used
src/metis/parmetis.c:265: warning: unused variable 'j'
src/metis/parmetis.c:265: warning: unused variable 'i'
src/metis/parmetis.c: In function 'METIS_EdgeComputeSeparator':
src/metis/parmetis.c:363: warning: value computed is not used
src/metis/parmetis.c:322: warning: unused variable 'j'
src/metis/parmetis.c:322: warning: unused variable 'i'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/estmem.c -o build/temp.linux-x86_64-2.5/src/metis/estmem.o
src/metis/estmem.c: In function 'METIS_EstimateMemory':
src/metis/estmem.c:22: warning: unused variable 'k'
src/metis/estmem.c:22: warning: unused variable 'j'
src/metis/estmem.c:22: warning: unused variable 'i'
src/metis/estmem.c: In function 'libmetis__ComputeCoarseGraphSize':
src/metis/estmem.c:111: warning: unused variable 'nedges'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/separator.c -o build/temp.linux-x86_64-2.5/src/metis/separator.o
src/metis/separator.c: In function 'libmetis__ConstructSeparator':
src/metis/separator.c:43: warning: value computed is not used
src/metis/separator.c:23: warning: unused variable 'k'
src/metis/separator.c: In function 'libmetis__ConstructMinCoverSeparator':
src/metis/separator.c:270: warning: value computed is not used
src/metis/separator.c:275: warning: value computed is not used
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mbalance.c -o build/temp.linux-x86_64-2.5/src/metis/mbalance.o
src/metis/mbalance.c: In function 'libmetis__MocGeneral2WayBalance':
src/metis/mbalance.c:38: warning: unused variable 'me'
src/metis/mbalance.c:38: warning: unused variable 'pass'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/frename.c -o build/temp.linux-x86_64-2.5/src/metis/frename.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mincover.c -o build/temp.linux-x86_64-2.5/src/metis/mincover.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/fm.c -o build/temp.linux-x86_64-2.5/src/metis/fm.o
src/metis/fm.c: In function 'libmetis__FM_2WayEdgeRefine':
src/metis/fm.c:21: warning: unused variable 'me'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mutil.c -o build/temp.linux-x86_64-2.5/src/metis/mutil.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/kwayrefine.c -o build/temp.linux-x86_64-2.5/src/metis/kwayrefine.o
src/metis/kwayrefine.c: In function 'libmetis__ComputeKWayPartitionParams':
src/metis/kwayrefine.c:231: warning: unused variable 'l'
src/metis/kwayrefine.c: In function 'libmetis__ProjectKWayPartition':
src/metis/kwayrefine.c:398: warning: value computed is not used
src/metis/kwayrefine.c: In function 'libmetis__IsBalanced':
src/metis/kwayrefine.c:419: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mrefine.c -o build/temp.linux-x86_64-2.5/src/metis/mrefine.o
src/metis/mrefine.c: In function 'libmetis__MocCompute2WayPartitionParams':
src/metis/mrefine.c:96: warning: unused variable 'other'
src/metis/mrefine.c:91: warning: unused variable 'l'
src/metis/mrefine.c:91: warning: unused variable 'k'
src/metis/mrefine.c: In function 'libmetis__MocProject2WayPartition':
src/metis/mrefine.c:211: warning: value computed is not used
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/pmetis.c -o build/temp.linux-x86_64-2.5/src/metis/pmetis.o
src/metis/pmetis.c: In function 'METIS_WPartGraphRecursive':
src/metis/pmetis.c:49: warning: unused variable 'j'
src/metis/pmetis.c: In function 'libmetis__MlevelRecursiveBisection':
src/metis/pmetis.c:107: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/balance.c -o build/temp.linux-x86_64-2.5/src/metis/balance.o
src/metis/balance.c: In function 'libmetis__Balance2Way':
src/metis/balance.c:22: warning: unused variable 'ed'
src/metis/balance.c:22: warning: unused variable 'id'
src/metis/balance.c:21: warning: unused variable 'gain'
src/metis/balance.c:21: warning: unused variable 'imax'
src/metis/balance.c:21: warning: unused variable 'from'
src/metis/balance.c:21: warning: unused variable 'nvtxs'
src/metis/balance.c:21: warning: unused variable 'j'
src/metis/balance.c:21: warning: unused variable 'i'
src/metis/balance.c: In function 'libmetis__Bnd2WayBalance':
src/metis/balance.c:48: warning: unused variable 'me'
src/metis/balance.c:48: warning: unused variable 'pass'
src/metis/balance.c: In function 'libmetis__General2WayBalance':
src/metis/balance.c:174: warning: unused variable 'me'
src/metis/balance.c:174: warning: unused variable 'pass'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/kwayvolrefine.c -o build/temp.linux-x86_64-2.5/src/metis/kwayvolrefine.o
src/metis/kwayvolrefine.c: In function 'libmetis__ComputeVolKWayPartitionParams':
src/metis/kwayvolrefine.c:130: warning: unused variable 'oedegrees'
src/metis/kwayvolrefine.c:129: warning: unused variable 'orinfo'
src/metis/kwayvolrefine.c:127: warning: unused variable 'pid'
src/metis/kwayvolrefine.c:127: warning: unused variable 'minvol'
src/metis/kwayvolrefine.c:127: warning: unused variable 'nbnd'
src/metis/kwayvolrefine.c:127: warning: unused variable 'l'
src/metis/kwayvolrefine.c:127: warning: unused variable 'kk'
src/metis/kwayvolrefine.c:127: warning: unused variable 'ii'
src/metis/kwayvolrefine.c: In function 'libmetis__ComputeKWayVolGains':
src/metis/kwayvolrefine.c:231: warning: suggest parentheses around + or - inside shift
src/metis/kwayvolrefine.c:207: warning: unused variable 'pid'
src/metis/kwayvolrefine.c:207: warning: unused variable 'l'
src/metis/kwayvolrefine.c: In function 'libmetis__ProjectVolKWayPartition':
src/metis/kwayvolrefine.c:395: warning: value computed is not used
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mmatch.c -o build/temp.linux-x86_64-2.5/src/metis/mmatch.o
src/metis/mmatch.c: In function 'libmetis__MCMatch_HEM':
src/metis/mmatch.c:81: warning: unused variable 'l'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mmd.c -o build/temp.linux-x86_64-2.5/src/metis/mmd.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/stat.c -o build/temp.linux-x86_64-2.5/src/metis/stat.o
src/metis/stat.c: In function 'libmetis__ComputePartitionInfo':
src/metis/stat.c:23: warning: unused variable 'k'
src/metis/stat.c: In function 'ComputePartitionInfoBipartite':
src/metis/stat.c:133: warning: unused variable 'tmpptr'
src/metis/stat.c:132: warning: unused variable 'k'
src/metis/stat.c: In function 'libmetis__ComputePartitionBalance':
src/metis/stat.c:239: warning: unused variable 'balance'
src/metis/stat.c: In function 'Moc_ComputePartitionBalance':
src/metis/stat.c:298: warning: unused variable 'balance'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/memory.c -o build/temp.linux-x86_64-2.5/src/metis/memory.o
src/metis/memory.c: In function 'AllocGraphFields':
src/metis/memory.c:229: warning: unused variable 'eptr'
src/metis/memory.c:229: warning: unused variable 'sptr'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/subdomains.c -o build/temp.linux-x86_64-2.5/src/metis/subdomains.o
src/metis/subdomains.c: In function 'libmetis__Random_KWayEdgeRefineMConn':
src/metis/subdomains.c:24: warning: unused variable 'jj'
src/metis/subdomains.c: In function 'libmetis__Greedy_KWayEdgeBalanceMConn':
src/metis/subdomains.c:314: warning: unused variable 'jj'
src/metis/subdomains.c:314: warning: unused variable 'iii'
src/metis/subdomains.c: In function 'libmetis__MoveGroupMConn':
src/metis/subdomains.c:895: warning: unused variable 'myndegrees'
src/metis/subdomains.c:895: warning: unused variable 'l'
src/metis/subdomains.c:895: warning: unused variable 'jj'
src/metis/subdomains.c: In function 'libmetis__EliminateComponents':
src/metis/subdomains.c:1050: warning: unused variable 'other'
src/metis/subdomains.c: In function 'libmetis__MoveGroup':
src/metis/subdomains.c:1176: warning: unused variable 'myndegrees'
src/metis/subdomains.c:1176: warning: unused variable 'l'
src/metis/subdomains.c:1176: warning: unused variable 'jj'
src/metis/subdomains.c: In function 'libmetis__EliminateComponents':
src/metis/subdomains.c:1050: warning: 'me' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/kmetis.c -o build/temp.linux-x86_64-2.5/src/metis/kmetis.o
src/metis/kmetis.c: In function 'METIS_WPartGraphKway':
src/metis/kmetis.c:45: warning: unused variable 'j'
src/metis/kmetis.c:45: warning: unused variable 'i'
src/metis/kmetis.c: In function 'libmetis__MlevelKWayPartitioning':
src/metis/kmetis.c:120: warning: value computed is not used
src/metis/kmetis.c:94: warning: unused variable 'tpwgts2'
src/metis/kmetis.c:94: warning: unused variable 'tvwgt'
src/metis/kmetis.c:94: warning: unused variable 'nvtxs'
src/metis/kmetis.c:94: warning: unused variable 'j'
src/metis/kmetis.c:94: warning: unused variable 'i'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mkmetis.c -o build/temp.linux-x86_64-2.5/src/metis/mkmetis.o
src/metis/mkmetis.c: In function 'METIS_mCPartGraphKway':
src/metis/mkmetis.c:28: warning: unused variable 'j'
src/metis/mkmetis.c:28: warning: unused variable 'i'
src/metis/mkmetis.c: In function 'libmetis__MCMlevelKWayPartitioning':
src/metis/mkmetis.c:116: warning: value computed is not used
src/metis/mkmetis.c:79: warning: unused variable 'nvtxs'
src/metis/mkmetis.c:79: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/sfm.c -o build/temp.linux-x86_64-2.5/src/metis/sfm.o
src/metis/sfm.c: In function 'libmetis__FM_2WayNodeBalance':
src/metis/sfm.c:926: warning: unused variable 'pass'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/kvmetis.c -o build/temp.linux-x86_64-2.5/src/metis/kvmetis.o
src/metis/kvmetis.c: In function 'METIS_WPartGraphVKway':
src/metis/kvmetis.c:47: warning: unused variable 'j'
src/metis/kvmetis.c:47: warning: unused variable 'i'
src/metis/kvmetis.c: In function 'libmetis__MlevelVolKWayPartitioning':
src/metis/kvmetis.c:123: warning: value computed is not used
src/metis/kvmetis.c:97: warning: unused variable 'tpwgts2'
src/metis/kvmetis.c:97: warning: unused variable 'tvwgt'
src/metis/kvmetis.c:97: warning: unused variable 'nvtxs'
src/metis/kvmetis.c:97: warning: unused variable 'j'
src/metis/kvmetis.c:97: warning: unused variable 'i'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mesh.c -o build/temp.linux-x86_64-2.5/src/metis/mesh.o
src/metis/mesh.c: In function 'METIS_MixedMeshToDualCount':
src/metis/mesh.c:77: warning: missing braces around initializer
src/metis/mesh.c:77: warning: (near initialization for 'mgcnum[0]')
src/metis/mesh.c:73: warning: unused variable 'mgcnums'
src/metis/mesh.c:69: warning: unused variable 'nedges'
src/metis/mesh.c: In function 'METIS_MixedMeshToDual':
src/metis/mesh.c:210: warning: missing braces around initializer
src/metis/mesh.c:210: warning: (near initialization for 'mgcnum[0]')
src/metis/mesh.c:206: warning: unused variable 'mgcnums'
src/metis/mesh.c:202: warning: unused variable 'nedges'
src/metis/mesh.c: In function 'METIS_MixedMeshToNodal':
src/metis/mesh.c:386: warning: missing braces around initializer
src/metis/mesh.c:386: warning: (near initialization for 'tableH[0]')
src/metis/mesh.c:395: warning: missing braces around initializer
src/metis/mesh.c:395: warning: (near initialization for 'tableQ[0]')
src/metis/mesh.c:382: warning: unused variable 'n'
src/metis/mesh.c:382: warning: unused variable 'kkk'
src/metis/mesh.c: In function 'GENDUALMETIS_COUNT':
src/metis/mesh.c:564: warning: unused variable 'nedges'
src/metis/mesh.c: In function 'GENDUALMETIS':
src/metis/mesh.c:649: warning: unused variable 'nedges'
src/metis/mesh.c: In function 'libmetis__TRINODALMETIS':
src/metis/mesh.c:750: warning: unused variable 'n'
src/metis/mesh.c:750: warning: unused variable 'm'
src/metis/mesh.c:750: warning: unused variable 'l'
src/metis/mesh.c:750: warning: unused variable 'kkk'
src/metis/mesh.c: In function 'libmetis__TETNODALMETIS':
src/metis/mesh.c:799: warning: unused variable 'n'
src/metis/mesh.c:799: warning: unused variable 'm'
src/metis/mesh.c:799: warning: unused variable 'l'
src/metis/mesh.c:799: warning: unused variable 'kkk'
src/metis/mesh.c: In function 'libmetis__HEXNODALMETIS':
src/metis/mesh.c:851: warning: missing braces around initializer
src/metis/mesh.c:851: warning: (near initialization for 'table[0]')
src/metis/mesh.c:848: warning: unused variable 'n'
src/metis/mesh.c:848: warning: unused variable 'm'
src/metis/mesh.c:848: warning: unused variable 'l'
src/metis/mesh.c:848: warning: unused variable 'kkk'
src/metis/mesh.c: In function 'QUADNODALMETIS':
src/metis/mesh.c:924: warning: missing braces around initializer
src/metis/mesh.c:924: warning: (near initialization for 'table[0]')
src/metis/mesh.c:921: warning: unused variable 'n'
src/metis/mesh.c:921: warning: unused variable 'm'
src/metis/mesh.c:921: warning: unused variable 'l'
src/metis/mesh.c:921: warning: unused variable 'kkk'
src/metis/mesh.c: In function 'LINENODALMETIS':
src/metis/mesh.c:986: warning: unused variable 'n'
src/metis/mesh.c:986: warning: unused variable 'm'
src/metis/mesh.c:986: warning: unused variable 'l'
src/metis/mesh.c:986: warning: unused variable 'kkk'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/initpart.c -o build/temp.linux-x86_64-2.5/src/metis/initpart.o
src/metis/initpart.c: In function 'libmetis__GrowBisection':
src/metis/initpart.c:191: warning: value computed is not used
src/metis/initpart.c:198: warning: value computed is not used
src/metis/initpart.c:88: warning: unused variable 'gain'
src/metis/initpart.c:86: warning: unused variable 'pass'
src/metis/initpart.c:86: warning: unused variable 'me'
src/metis/initpart.c:86: warning: unused variable 'mincut'
src/metis/initpart.c:86: warning: unused variable 'icut'
src/metis/initpart.c:86: warning: unused variable 'from'
src/metis/initpart.c: In function 'libmetis__GrowBisectionNode':
src/metis/initpart.c:330: warning: value computed is not used
src/metis/initpart.c:335: warning: value computed is not used
src/metis/initpart.c:217: warning: unused variable 'gain'
src/metis/initpart.c:214: warning: unused variable 'pass'
src/metis/initpart.c:214: warning: unused variable 'me'
src/metis/initpart.c:214: warning: unused variable 'mincut'
src/metis/initpart.c:214: warning: unused variable 'icut'
src/metis/initpart.c:214: warning: unused variable 'from'
src/metis/initpart.c: In function 'libmetis__RandomBisection':
src/metis/initpart.c:410: warning: value computed is not used
src/metis/initpart.c:417: warning: value computed is not used
src/metis/initpart.c:351: warning: unused variable 'pass'
src/metis/initpart.c:351: warning: unused variable 'me'
src/metis/initpart.c:351: warning: unused variable 'mincut'
src/metis/initpart.c:351: warning: unused variable 'icut'
src/metis/initpart.c:350: warning: unused variable 'from'
src/metis/initpart.c:350: warning: unused variable 'k'
src/metis/initpart.c:350: warning: unused variable 'j'
src/metis/initpart.c:350: warning: 'bestcut' may be used uninitialized in this function
src/metis/initpart.c: In function 'libmetis__GrowBisection':
src/metis/initpart.c:86: warning: 'bestcut' may be used uninitialized in this function
src/metis/initpart.c: In function 'libmetis__GrowBisectionNode':
src/metis/initpart.c:214: warning: 'bestcut' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/bucketsort.c -o build/temp.linux-x86_64-2.5/src/metis/bucketsort.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/match.c -o build/temp.linux-x86_64-2.5/src/metis/match.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/meshpart.c -o build/temp.linux-x86_64-2.5/src/metis/meshpart.o
src/metis/meshpart.c: In function 'METIS_PartMixedMeshNodal':
src/metis/meshpart.c:121: warning: unused variable 'esize'
src/metis/meshpart.c: In function 'METIS_PartMixedMeshDual':
src/metis/meshpart.c:427: warning: 'esize' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mcoarsen.c -o build/temp.linux-x86_64-2.5/src/metis/mcoarsen.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mkwayfmh.c -o build/temp.linux-x86_64-2.5/src/metis/mkwayfmh.o
src/metis/mkwayfmh.c: In function 'libmetis__MCRandom_KWayEdgeRefineHorizontal':
src/metis/mkwayfmh.c:23: warning: unused variable 'l'
src/metis/mkwayfmh.c:23: warning: unused variable 'jj'
src/metis/mkwayfmh.c: In function 'libmetis__MCGreedy_KWayEdgeBalanceHorizontal':
src/metis/mkwayfmh.c:260: warning: unused variable 'l'
src/metis/mkwayfmh.c:260: warning: unused variable 'jj'
src/metis/mkwayfmh.c:260: warning: unused variable 'iii'
src/metis/mkwayfmh.c: In function 'libmetis__IsHBalanceBetterFT':
src/metis/mkwayfmh.c:595: warning: unused variable 'k'
src/metis/mkwayfmh.c:595: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/srefine.c -o build/temp.linux-x86_64-2.5/src/metis/srefine.o
src/metis/srefine.c: In function 'libmetis__Compute2WayNodePartitionParams':
src/metis/srefine.c:88: warning: unused variable 'l'
src/metis/srefine.c:88: warning: unused variable 'k'
src/metis/srefine.c: In function 'libmetis__Project2WayNodePartition':
src/metis/srefine.c:143: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/ccgraph.c -o build/temp.linux-x86_64-2.5/src/metis/ccgraph.o
src/metis/ccgraph.c: In function 'libmetis__CreateCoarseGraph':
src/metis/ccgraph.c:79: warning: value computed is not used
src/metis/ccgraph.c:22: warning: unused variable 'l'
src/metis/ccgraph.c: In function 'libmetis__CreateCoarseGraphNoMask':
src/metis/ccgraph.c:247: warning: value computed is not used
src/metis/ccgraph.c: In function 'libmetis__CreateCoarseGraph_NVW':
src/metis/ccgraph.c:330: warning: unused variable 'l'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/coarsen.c -o build/temp.linux-x86_64-2.5/src/metis/coarsen.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mpmetis.c -o build/temp.linux-x86_64-2.5/src/metis/mpmetis.o
src/metis/mpmetis.c: In function 'METIS_mCPartGraphRecursive':
src/metis/mpmetis.c:28: warning: unused variable 'j'
src/metis/mpmetis.c:28: warning: unused variable 'i'
src/metis/mpmetis.c: In function 'METIS_mCHPartGraphRecursive':
src/metis/mpmetis.c:110: warning: value computed is not used
src/metis/mpmetis.c:82: warning: unused variable 'j'
src/metis/mpmetis.c:82: warning: unused variable 'i'
src/metis/mpmetis.c: In function 'METIS_mCPartGraphRecursiveInternal':
src/metis/mpmetis.c:140: warning: unused variable 'j'
src/metis/mpmetis.c:140: warning: unused variable 'i'
src/metis/mpmetis.c: In function 'METIS_mCHPartGraphRecursiveInternal':
src/metis/mpmetis.c:213: warning: value computed is not used
src/metis/mpmetis.c:188: warning: unused variable 'j'
src/metis/mpmetis.c:188: warning: unused variable 'i'
src/metis/mpmetis.c: In function 'libmetis__MCMlevelRecursiveBisection':
src/metis/mpmetis.c:241: warning: unused variable 'ncon'
src/metis/mpmetis.c:241: warning: unused variable 'j'
src/metis/mpmetis.c: In function 'libmetis__MCHMlevelRecursiveBisection':
src/metis/mpmetis.c:293: warning: unused variable 'j'
src/metis/mpmetis.c: In function 'libmetis__MCHMlevelEdgeBisection':
src/metis/mpmetis.c:385: warning: unused variable 'i'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/myqsort.c -o build/temp.linux-x86_64-2.5/src/metis/myqsort.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/checkgraph.c -o build/temp.linux-x86_64-2.5/src/metis/checkgraph.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/util.c -o build/temp.linux-x86_64-2.5/src/metis/util.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/timing.c -o build/temp.linux-x86_64-2.5/src/metis/timing.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/fortran.c -o build/temp.linux-x86_64-2.5/src/metis/fortran.o
src/metis/fortran.c: In function 'libmetis__ChangeMesh2FNumbering2':
src/metis/fortran.c:127: warning: unused variable 'nedges'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/rkmetis.c -o build/temp.linux-x86_64-2.5/src/metis/rkmetis.o
src/metis/rkmetis.c: In function 'METIS_WRefineGraphKway':
src/metis/rkmetis.c:47: warning: unused variable 'j'
src/metis/rkmetis.c:47: warning: unused variable 'i'
src/metis/rkmetis.c: In function 'MlevelKWayRefinement':
src/metis/rkmetis.c:115: warning: value computed is not used
src/metis/rkmetis.c:100: warning: unused variable 'edgecut'
src/metis/rkmetis.c:100: warning: unused variable 'options'
src/metis/rkmetis.c:100: warning: unused variable 'numflag'
src/metis/rkmetis.c:100: warning: unused variable 'wgtflag'
src/metis/rkmetis.c:98: warning: unused variable 'tpwgts2'
src/metis/rkmetis.c:98: warning: unused variable 'tvwgt'
src/metis/rkmetis.c:98: warning: unused variable 'nvtxs'
src/metis/rkmetis.c:98: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/pqueue.c -o build/temp.linux-x86_64-2.5/src/metis/pqueue.o
src/metis/pqueue.c: In function 'libmetis__PQueueInsert':
src/metis/pqueue.c:139: warning: unused variable 'k'
src/metis/pqueue.c: In function 'libmetis__PQueueUpdate':
src/metis/pqueue.c:296: warning: unused variable 'newnode'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/graph.c -o build/temp.linux-x86_64-2.5/src/metis/graph.o
src/metis/graph.c: In function 'libmetis__SetUpGraph':
src/metis/graph.c:22: warning: unused variable 'k'
src/metis/graph.c: In function 'libmetis__SetUpGraph2':
src/metis/graph.c:120: warning: value computed is not used
src/metis/graph.c: In function 'libmetis__VolSetUpGraph':
src/metis/graph.c:146: warning: unused variable 'k'
src/metis/graph.c: In function 'libmetis__IsConnected2':
src/metis/graph.c:369: warning: unused variable 'wgt'
src/metis/graph.c: In function 'libmetis__FindComponents':
src/metis/graph.c:432: warning: unused variable 'wgt'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mfm.c -o build/temp.linux-x86_64-2.5/src/metis/mfm.o
src/metis/mfm.c: In function 'libmetis__MocFM_2WayEdgeRefine':
src/metis/mfm.c:22: warning: unused variable 'me'
src/metis/mfm.c: In function 'libmetis__SelectQueue':
src/metis/mfm.c:241: warning: 'max' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mbalance2.c -o build/temp.linux-x86_64-2.5/src/metis/mbalance2.o
src/metis/mbalance2.c: In function 'libmetis__MocBalance2Way2':
src/metis/mbalance2.c:24: warning: unused variable 'i'
src/metis/mbalance2.c: In function 'libmetis__MocGeneral2WayBalance2':
src/metis/mbalance2.c:39: warning: unused variable 'me'
src/metis/mbalance2.c:39: warning: unused variable 'pass'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/kwayvolfm.c -o build/temp.linux-x86_64-2.5/src/metis/kwayvolfm.o
src/metis/kwayvolfm.c: In function 'libmetis__Random_KWayVolRefine':
src/metis/kwayvolfm.c:23: warning: unused variable 'me'
src/metis/kwayvolfm.c:22: warning: unused variable 'u'
src/metis/kwayvolfm.c:22: warning: unused variable 'l'
src/metis/kwayvolfm.c:22: warning: unused variable 'kk'
src/metis/kwayvolfm.c:22: warning: unused variable 'jj'
src/metis/kwayvolfm.c: In function 'libmetis__Random_KWayVolRefineMConn':
src/metis/kwayvolfm.c:166: warning: unused variable 'u'
src/metis/kwayvolfm.c:166: warning: unused variable 'kk'
src/metis/kwayvolfm.c:166: warning: unused variable 'jj'
src/metis/kwayvolfm.c: In function 'libmetis__Greedy_KWayVolBalance':
src/metis/kwayvolfm.c:406: warning: unused variable 'gain'
src/metis/kwayvolfm.c:406: warning: unused variable 'me'
src/metis/kwayvolfm.c:405: warning: unused variable 'u'
src/metis/kwayvolfm.c:405: warning: unused variable 'l'
src/metis/kwayvolfm.c:405: warning: unused variable 'kk'
src/metis/kwayvolfm.c:405: warning: unused variable 'jj'
src/metis/kwayvolfm.c:405: warning: unused variable 'iii'
src/metis/kwayvolfm.c: In function 'libmetis__Greedy_KWayVolBalanceMConn':
src/metis/kwayvolfm.c:560: warning: unused variable 'gain'
src/metis/kwayvolfm.c:559: warning: unused variable 'u'
src/metis/kwayvolfm.c:559: warning: unused variable 'kk'
src/metis/kwayvolfm.c:559: warning: unused variable 'jj'
src/metis/kwayvolfm.c:559: warning: unused variable 'iii'
src/metis/kwayvolfm.c: In function 'libmetis__KWayVolUpdate':
src/metis/kwayvolfm.c:808: warning: unused variable 'l'
src/metis/kwayvolfm.c:808: warning: unused variable 'iii'
src/metis/kwayvolfm.c: In function 'libmetis__ComputeKWayVolume':
src/metis/kwayvolfm.c:1163: warning: suggest parentheses around + or - inside shift
src/metis/kwayvolfm.c:1091: warning: unused variable 'pid'
src/metis/kwayvolfm.c:1091: warning: unused variable 'l'
src/metis/kwayvolfm.c: In function 'libmetis__ComputeVolume':
src/metis/kwayvolfm.c:1182: warning: unused variable 'me'
src/metis/kwayvolfm.c: In function 'libmetis__CheckVolKWayPartitionParams':
src/metis/kwayvolfm.c:1222: warning: unused variable 'bndptr'
src/metis/kwayvolfm.c:1222: warning: unused variable 'bndind'
src/metis/kwayvolfm.c:1222: warning: unused variable 'pwgts'
src/metis/kwayvolfm.c:1221: warning: unused variable 'minvol'
src/metis/kwayvolfm.c:1221: warning: unused variable 'mincut'
src/metis/kwayvolfm.c:1221: warning: unused variable 'nbnd'
src/metis/kwayvolfm.c:1221: warning: unused variable 'l'
src/metis/kwayvolfm.c: In function 'EliminateVolComponents':
src/metis/kwayvolfm.c:1616: warning: 'me' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mrefine2.c -o build/temp.linux-x86_64-2.5/src/metis/mrefine2.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/refine.c -o build/temp.linux-x86_64-2.5/src/metis/refine.o
src/metis/refine.c: In function 'libmetis__Compute2WayPartitionParams':
src/metis/refine.c:83: warning: unused variable 'other'
src/metis/refine.c:79: warning: unused variable 'l'
src/metis/refine.c:79: warning: unused variable 'k'
src/metis/refine.c: In function 'libmetis__Project2WayPartition':
src/metis/refine.c:198: warning: value computed is not used
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mkwayrefine.c -o build/temp.linux-x86_64-2.5/src/metis/mkwayrefine.o
src/metis/mkwayrefine.c: In function 'libmetis__MocComputeKWayPartitionParams':
src/metis/mkwayrefine.c:89: warning: unused variable 'l'
src/metis/mkwayrefine.c: In function 'libmetis__MocProjectKWayPartition':
src/metis/mkwayrefine.c:258: warning: value computed is not used
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/ometis.c -o build/temp.linux-x86_64-2.5/src/metis/ometis.o
src/metis/ometis.c: In function 'METIS_EdgeND':
src/metis/ometis.c:25: warning: unused variable 'j'
src/metis/ometis.c: In function 'METIS_NodeND':
src/metis/ometis.c:163: warning: value computed is not used
src/metis/ometis.c:82: warning: unused variable 'nflag'
src/metis/ometis.c:82: warning: unused variable 'wflag'
src/metis/ometis.c: In function 'METIS_NodeWND':
src/metis/ometis.c:207: warning: unused variable 'tvwgt'
src/metis/ometis.c:207: warning: unused variable 'j'
src/metis/ometis.c: In function 'libmetis__MlevelNestedDissection':
src/metis/ometis.c:265: warning: unused variable 'j'
src/metis/ometis.c: In function 'libmetis__MlevelNestedDissectionCC':
src/metis/ometis.c:325: warning: unused variable 'j'
src/metis/ometis.c: In function 'libmetis__MlevelNodeBisectionMultiple':
src/metis/ometis.c:409: warning: value computed is not used
src/metis/ometis.c:420: warning: value computed is not used
src/metis/ometis.c:442: warning: value computed is not used
src/metis/ometis.c:453: warning: value computed is not used
src/metis/ometis.c:388: warning: unused variable 'tmp'
src/metis/ometis.c: In function 'libmetis__SplitGraphOrder':
src/metis/ometis.c:512: warning: unused variable 'auxadjwgt'
src/metis/ometis.c: In function 'libmetis__MMDOrder':
src/metis/ometis.c:639: warning: suggest parentheses around + or - inside shift
src/metis/ometis.c:617: warning: unused variable 'j'
src/metis/ometis.c: In function 'libmetis__SplitGraphOrderCC':
src/metis/ometis.c:663: warning: unused variable 'mypart'
src/metis/ometis.c: In function 'libmetis__MlevelNodeBisectionMultiple':
src/metis/ometis.c:388: warning: 'mincut' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/compress.c -o build/temp.linux-x86_64-2.5/src/metis/compress.o
src/metis/compress.c: In function 'libmetis__PruneGraph':
src/metis/compress.c:162: warning: unused variable 'padjwgt'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mfm2.c -o build/temp.linux-x86_64-2.5/src/metis/mfm2.o
src/metis/mfm2.c: In function 'libmetis__MocFM_2WayEdgeRefine2':
src/metis/mfm2.c:23: warning: unused variable 'me'
src/metis/mfm2.c: In function 'libmetis__IsBetter2wayBalance':
src/metis/mfm2.c:328: warning: unused variable 'j'
src/metis/mfm2.c: In function 'libmetis__SelectQueue2':
src/metis/mfm2.c:267: warning: 'max' may be used uninitialized in this function
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/cmetis.c -o build/temp.linux-x86_64-2.5/src/metis/cmetis.o
src/metis/cmetis.c: In function 'METIS_PartGraphForContact':
src/metis/cmetis.c:131: warning: value computed is not used
src/metis/cmetis.c:158: warning: value computed is not used
src/metis/cmetis.c:27: warning: unused variable 'ii'
src/metis/cmetis.c: In function 'METIS_SetupContact0':
src/metis/cmetis.c:283: warning: value computed is not used
src/metis/cmetis.c:231: warning: unused variable 'cgraph'
src/metis/cmetis.c:231: warning: unused variable 'graph'
src/metis/cmetis.c:230: warning: unused variable 'adjwgt'
src/metis/cmetis.c:229: warning: unused variable 'cpart'
src/metis/cmetis.c:229: warning: unused variable 'csflag'
src/metis/cmetis.c:229: warning: unused variable 'mcvwgt'
src/metis/cmetis.c:228: warning: unused variable 'rnumflag'
src/metis/cmetis.c:228: warning: unused variable 'rwgtflag'
src/metis/cmetis.c:228: warning: unused variable 'mcnumflag'
src/metis/cmetis.c:228: warning: unused variable 'wgtflag'
src/metis/cmetis.c:228: warning: unused variable 'ii'
src/metis/cmetis.c:228: warning: unused variable 'j'
src/metis/cmetis.c: In function 'METIS_SetupContact':
src/metis/cmetis.c:357: warning: value computed is not used
src/metis/cmetis.c:309: warning: unused variable 'cgraph'
src/metis/cmetis.c:309: warning: unused variable 'graph'
src/metis/cmetis.c:308: warning: unused variable 'adjwgt'
src/metis/cmetis.c:307: warning: unused variable 'cpart'
src/metis/cmetis.c:307: warning: unused variable 'csflag'
src/metis/cmetis.c:307: warning: unused variable 'mcvwgt'
src/metis/cmetis.c:306: warning: unused variable 'rnumflag'
src/metis/cmetis.c:306: warning: unused variable 'rwgtflag'
src/metis/cmetis.c:306: warning: unused variable 'mcnumflag'
src/metis/cmetis.c:306: warning: unused variable 'wgtflag'
src/metis/cmetis.c:306: warning: unused variable 'ncontacts'
src/metis/cmetis.c:306: warning: unused variable 'ii'
src/metis/cmetis.c:306: warning: unused variable 'j'
src/metis/cmetis.c: In function 'METIS_FindContacts':
src/metis/cmetis.c:408: warning: value computed is not used
src/metis/cmetis.c: In function 'InduceDecissionTree':
src/metis/cmetis.c:601: warning: value computed is not used
src/metis/cmetis.c:511: warning: unused variable 'nsvtxs'
src/metis/cmetis.c:511: warning: unused variable 'cleanmarked'
src/metis/cmetis.c: In function 'BuildDTLeafContents':
src/metis/cmetis.c:761: warning: unused variable 'k'
src/metis/cmetis.c:761: warning: unused variable 'j'
src/metis/cmetis.c: In function 'FindBoxContacts':
src/metis/cmetis.c:848: warning: unused variable 'l'
src/metis/cmetis.c: In function 'CheckDTree':
src/metis/cmetis.c:914: warning: unused variable 'k'
src/metis/cmetis.c:914: warning: unused variable 'j'
src/metis/cmetis.c: In function 'CheckDTreeSurface':
src/metis/cmetis.c:938: warning: unused variable 'k'
src/metis/cmetis.c:938: warning: unused variable 'j'
src/metis/cmetis.c: In function 'METIS_PartSurfForContactRCB':
src/metis/cmetis.c:1002: warning: operation on 'nsurf' may be undefined
src/metis/cmetis.c:1026: warning: value computed is not used
src/metis/cmetis.c:971: warning: unused variable 'ncon'
src/metis/cmetis.c:971: warning: unused variable 'j'
src/metis/cmetis.c: In function 'InduceRCBTree':
src/metis/cmetis.c:1051: warning: unused variable 'k'
src/metis/cmetis.c:1051: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/mrkmetis.c -o build/temp.linux-x86_64-2.5/src/metis/mrkmetis.o
src/metis/mrkmetis.c: In function 'METIS_mCRefineGraphKway':
src/metis/mrkmetis.c:28: warning: unused variable 'j'
src/metis/mrkmetis.c:28: warning: unused variable 'i'
src/metis/mrkmetis.c: In function 'MCMlevelKWayRefinement':
src/metis/mrkmetis.c:95: warning: value computed is not used
src/metis/mrkmetis.c:80: warning: unused variable 'edgecut'
src/metis/mrkmetis.c:80: warning: unused variable 'options'
src/metis/mrkmetis.c:78: warning: unused variable 'nvtxs'
src/metis/mrkmetis.c:78: warning: unused variable 'j'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/debug.c -o build/temp.linux-x86_64-2.5/src/metis/debug.o
src/metis/debug.c: In function 'libmetis__CheckNodeBnd':
src/metis/debug.c:152: warning: unused variable 'j'
src/metis/debug.c: In function 'libmetis__CheckNodePartitionParams':
src/metis/debug.c:205: warning: unused variable 'l'
src/metis/debug.c:205: warning: unused variable 'k'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/streamio.c -o build/temp.linux-x86_64-2.5/src/metis/streamio.o
src/metis/streamio.c: In function 'mscanf':
src/metis/streamio.c:110: warning: implicit declaration of function 'vscanf'
src/metis/streamio.c: In function 'msscanf':
src/metis/streamio.c:133: warning: implicit declaration of function 'vsscanf'
src/metis/streamio.c: In function 'mfscanf':
src/metis/streamio.c:155: warning: implicit declaration of function 'vfscanf'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/metis/kwayfm.c -o build/temp.linux-x86_64-2.5/src/metis/kwayfm.o
src/metis/kwayfm.c: In function 'libmetis__Random_KWayEdgeRefine':
src/metis/kwayfm.c:21: warning: unused variable 'l'
src/metis/kwayfm.c:21: warning: unused variable 'jj'
src/metis/kwayfm.c: In function 'libmetis__Greedy_KWayEdgeRefine':
src/metis/kwayfm.c:224: warning: unused variable 'l'
src/metis/kwayfm.c:224: warning: unused variable 'jj'
src/metis/kwayfm.c: In function 'libmetis__Greedy_KWayEdgeBalance':
src/metis/kwayfm.c:454: warning: unused variable 'l'
src/metis/kwayfm.c:454: warning: unused variable 'jj'
src/metis/kwayfm.c:454: warning: unused variable 'iii'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DHAVE_MREMAP=0 -Isrc/gklib -Isrc/metis -I/home/andreas/pool/include/boost-1_39 -I/usr/include/python2.5 -c src/wrapper/wrapper.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrapper.o
In file included from /home/andreas/pool/include/boost-1_39/boost/python/detail/wrap_python.hpp:50,
from /home/andreas/pool/include/boost-1_39/boost/python/detail/prefix.hpp:13,
from /home/andreas/pool/include/boost-1_39/boost/python/args.hpp:8,
from /home/andreas/pool/include/boost-1_39/boost/python.hpp:11,
from src/wrapper/wrapper.cpp:2:
/usr/include/python2.5/pyconfig.h:347:1: warning: "HAVE_MREMAP" redefined
<command-line>: warning: this is the location of the previous definition
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/gklib/timers.o build/temp.linux-x86_64-2.5/src/gklib/blas.o build/temp.linux-x86_64-2.5/src/gklib/memory.o build/temp.linux-x86_64-2.5/src/gklib/error.o build/temp.linux-x86_64-2.5/src/gklib/dlmalloc.o build/temp.linux-x86_64-2.5/src/gklib/getopt.o build/temp.linux-x86_64-2.5/src/gklib/b64.o build/temp.linux-x86_64-2.5/src/gklib/util.o build/temp.linux-x86_64-2.5/src/gklib/pqueue.o build/temp.linux-x86_64-2.5/src/gklib/tokenizer.o build/temp.linux-x86_64-2.5/src/gklib/pdb.o build/temp.linux-x86_64-2.5/src/gklib/fs.o build/temp.linux-x86_64-2.5/src/gklib/dfkvkselect.o build/temp.linux-x86_64-2.5/src/gklib/omp.o build/temp.linux-x86_64-2.5/src/gklib/sort.o build/temp.linux-x86_64-2.5/src/gklib/io.o build/temp.linux-x86_64-2.5/src/gklib/string.o build/temp.linux-x86_64-2.5/src/gklib/htable.o build/temp.linux-x86_64-2.5/src/gklib/seq.o build/temp.linux-x86_64-2.5/src/metis/minitpart2.o build/temp.linux-x86_64-2.5/src/metis/minitpart.o build/temp.linux-x86_64-2.5/src/metis/parmetis.o build/temp.linux-x86_64-2.5/src/metis/estmem.o build/temp.linux-x86_64-2.5/src/metis/separator.o build/temp.linux-x86_64-2.5/src/metis/mbalance.o build/temp.linux-x86_64-2.5/src/metis/frename.o build/temp.linux-x86_64-2.5/src/metis/mincover.o build/temp.linux-x86_64-2.5/src/metis/fm.o build/temp.linux-x86_64-2.5/src/metis/mutil.o build/temp.linux-x86_64-2.5/src/metis/kwayrefine.o build/temp.linux-x86_64-2.5/src/metis/mrefine.o build/temp.linux-x86_64-2.5/src/metis/pmetis.o build/temp.linux-x86_64-2.5/src/metis/balance.o build/temp.linux-x86_64-2.5/src/metis/kwayvolrefine.o build/temp.linux-x86_64-2.5/src/metis/mmatch.o build/temp.linux-x86_64-2.5/src/metis/mmd.o build/temp.linux-x86_64-2.5/src/metis/stat.o build/temp.linux-x86_64-2.5/src/metis/memory.o build/temp.linux-x86_64-2.5/src/metis/subdomains.o build/temp.linux-x86_64-2.5/src/metis/kmetis.o build/temp.linux-x86_64-2.5/src/metis/mkmetis.o build/temp.linux-x86_64-2.5/src/metis/sfm.o build/temp.linux-x86_64-2.5/src/metis/kvmetis.o build/temp.linux-x86_64-2.5/src/metis/mesh.o build/temp.linux-x86_64-2.5/src/metis/initpart.o build/temp.linux-x86_64-2.5/src/metis/bucketsort.o build/temp.linux-x86_64-2.5/src/metis/match.o build/temp.linux-x86_64-2.5/src/metis/meshpart.o build/temp.linux-x86_64-2.5/src/metis/mcoarsen.o build/temp.linux-x86_64-2.5/src/metis/mkwayfmh.o build/temp.linux-x86_64-2.5/src/metis/srefine.o build/temp.linux-x86_64-2.5/src/metis/ccgraph.o build/temp.linux-x86_64-2.5/src/metis/coarsen.o build/temp.linux-x86_64-2.5/src/metis/mpmetis.o build/temp.linux-x86_64-2.5/src/metis/myqsort.o build/temp.linux-x86_64-2.5/src/metis/checkgraph.o build/temp.linux-x86_64-2.5/src/metis/util.o build/temp.linux-x86_64-2.5/src/metis/timing.o build/temp.linux-x86_64-2.5/src/metis/fortran.o build/temp.linux-x86_64-2.5/src/metis/rkmetis.o build/temp.linux-x86_64-2.5/src/metis/pqueue.o build/temp.linux-x86_64-2.5/src/metis/graph.o build/temp.linux-x86_64-2.5/src/metis/mfm.o build/temp.linux-x86_64-2.5/src/metis/mbalance2.o build/temp.linux-x86_64-2.5/src/metis/kwayvolfm.o build/temp.linux-x86_64-2.5/src/metis/mrefine2.o build/temp.linux-x86_64-2.5/src/metis/refine.o build/temp.linux-x86_64-2.5/src/metis/mkwayrefine.o build/temp.linux-x86_64-2.5/src/metis/ometis.o build/temp.linux-x86_64-2.5/src/metis/compress.o build/temp.linux-x86_64-2.5/src/metis/mfm2.o build/temp.linux-x86_64-2.5/src/metis/cmetis.o build/temp.linux-x86_64-2.5/src/metis/mrkmetis.o build/temp.linux-x86_64-2.5/src/metis/debug.o build/temp.linux-x86_64-2.5/src/metis/streamio.o build/temp.linux-x86_64-2.5/src/metis/kwayfm.o build/temp.linux-x86_64-2.5/src/wrapper/wrapper.o -L/home/andreas/pool/lib -lboost_python-gcc43-mt -o build/lib.linux-x86_64-2.5/pymetis/_internal.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pymetis
copying build/lib.linux-x86_64-2.5/pymetis/__init__.py -> build/bdist.linux-x86_64/egg/pymetis
copying build/lib.linux-x86_64-2.5/pymetis/_internal.so -> build/bdist.linux-x86_64/egg/pymetis
byte-compiling build/bdist.linux-x86_64/egg/pymetis/__init__.py to __init__.pyc
creating stub loader for pymetis/_internal.so
byte-compiling build/bdist.linux-x86_64/egg/pymetis/_internal.py to _internal.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying PyMetis.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyMetis.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyMetis.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyMetis.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/PyMetis-0.91.1-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing PyMetis-0.91.1-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyMetis-0.91.1-py2.5-linux-x86_64.egg
Extracting PyMetis-0.91.1-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding PyMetis 0.91.1 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyMetis-0.91.1-py2.5-linux-x86_64.egg
Processing dependencies for PyMetis==0.91.1
Finished processing dependencies for PyMetis==0.91.1
------------------------------------------------------------------------
INSTALLING hedge
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/hedge/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/hedge/setuptools.pth
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LD_LIBRARY_PATH
**************************************
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running install
running bdist_egg
running egg_info
creating hedge.egg-info
writing hedge.egg-info/PKG-INFO
writing top-level names to hedge.egg-info/top_level.txt
writing dependency_links to hedge.egg-info/dependency_links.txt
writing manifest file 'hedge.egg-info/SOURCES.txt'
reading manifest file 'hedge.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'src/cpp/*.hpp'
writing manifest file 'hedge.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/hedge
copying hedge/discretization.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/compiler.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/__init__.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/tools.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/partition.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/interpolation.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/polynomial.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/flux.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/element.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/data.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/pde.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/optemplate.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/quadrature.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/visualization.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/log.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/vtk.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/mesh.py -> build/lib.linux-x86_64-2.5/hedge
copying hedge/iterative.py -> build/lib.linux-x86_64-2.5/hedge
creating build/lib.linux-x86_64-2.5/hedge/models
copying hedge/models/__init__.py -> build/lib.linux-x86_64-2.5/hedge/models
copying hedge/models/diffusion.py -> build/lib.linux-x86_64-2.5/hedge/models
copying hedge/models/nd_calculus.py -> build/lib.linux-x86_64-2.5/hedge/models
copying hedge/models/em.py -> build/lib.linux-x86_64-2.5/hedge/models
copying hedge/models/poisson.py -> build/lib.linux-x86_64-2.5/hedge/models
copying hedge/models/advection.py -> build/lib.linux-x86_64-2.5/hedge/models
copying hedge/models/pml.py -> build/lib.linux-x86_64-2.5/hedge/models
creating build/lib.linux-x86_64-2.5/hedge/backends
copying hedge/backends/vector_expr.py -> build/lib.linux-x86_64-2.5/hedge/backends
copying hedge/backends/__init__.py -> build/lib.linux-x86_64-2.5/hedge/backends
copying hedge/backends/exec_common.py -> build/lib.linux-x86_64-2.5/hedge/backends
copying hedge/backends/base.py -> build/lib.linux-x86_64-2.5/hedge/backends
creating build/lib.linux-x86_64-2.5/hedge/backends/jit
copying hedge/backends/jit/vector_expr.py -> build/lib.linux-x86_64-2.5/hedge/backends/jit
copying hedge/backends/jit/compiler.py -> build/lib.linux-x86_64-2.5/hedge/backends/jit
copying hedge/backends/jit/__init__.py -> build/lib.linux-x86_64-2.5/hedge/backends/jit
copying hedge/backends/jit/lift.py -> build/lib.linux-x86_64-2.5/hedge/backends/jit
copying hedge/backends/jit/flux.py -> build/lib.linux-x86_64-2.5/hedge/backends/jit
copying hedge/backends/jit/diff.py -> build/lib.linux-x86_64-2.5/hedge/backends/jit
creating build/lib.linux-x86_64-2.5/hedge/backends/mpi
copying hedge/backends/mpi/__init__.py -> build/lib.linux-x86_64-2.5/hedge/backends/mpi
creating build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/vector_expr.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/__init__.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/tools.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/diff_shared_fld.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/execute.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/optemplate.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/diff_shared_segmat.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/el_local_shared_fld.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/el_local_shared_segmat.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/kernelbase.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/plan.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
copying hedge/backends/cuda/fluxgather.py -> build/lib.linux-x86_64-2.5/hedge/backends/cuda
creating build/lib.linux-x86_64-2.5/hedge/timestep
copying hedge/timestep/__init__.py -> build/lib.linux-x86_64-2.5/hedge/timestep
copying hedge/timestep/ab.py -> build/lib.linux-x86_64-2.5/hedge/timestep
copying hedge/timestep/rk4.py -> build/lib.linux-x86_64-2.5/hedge/timestep
copying hedge/timestep/base.py -> build/lib.linux-x86_64-2.5/hedge/timestep
copying hedge/timestep/stability.py -> build/lib.linux-x86_64-2.5/hedge/timestep
creating build/lib.linux-x86_64-2.5/hedge/timestep/multirate_ab
copying hedge/timestep/multirate_ab/__init__.py -> build/lib.linux-x86_64-2.5/hedge/timestep/multirate_ab
copying hedge/timestep/multirate_ab/methods.py -> build/lib.linux-x86_64-2.5/hedge/timestep/multirate_ab
copying hedge/timestep/multirate_ab/processors.py -> build/lib.linux-x86_64-2.5/hedge/timestep/multirate_ab
running build_ext
building '_internal' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/wrapper
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_BLAS=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/wrap_main.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_main.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_BLAS=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/wrap_base.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_base.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_BLAS=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/wrap_mesh.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_mesh.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_BLAS=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/wrap_special_function.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_special_function.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_BLAS=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/wrap_flux.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_flux.o
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_BLAS=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/wrap_volume_operators.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_volume_operators.o
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/wrapper/wrap_main.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_base.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_mesh.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_special_function.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_flux.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_volume_operators.o -L/home/andreas/pool/lib -L/home/andreas/mach/x86_64/pool/lib -lboost_python-gcc43-mt -lf77blas -latlas -lgfortran -o build/lib.linux-x86_64-2.5/hedge/_internal.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/discretization.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/compiler.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/__init__.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/tools.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/partition.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/interpolation.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/polynomial.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/flux.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/element.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/data.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/pde.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/optemplate.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/quadrature.py -> build/bdist.linux-x86_64/egg/hedge
creating build/bdist.linux-x86_64/egg/hedge/backends
copying build/lib.linux-x86_64-2.5/hedge/backends/vector_expr.py -> build/bdist.linux-x86_64/egg/hedge/backends
copying build/lib.linux-x86_64-2.5/hedge/backends/__init__.py -> build/bdist.linux-x86_64/egg/hedge/backends
copying build/lib.linux-x86_64-2.5/hedge/backends/exec_common.py -> build/bdist.linux-x86_64/egg/hedge/backends
creating build/bdist.linux-x86_64/egg/hedge/backends/jit
copying build/lib.linux-x86_64-2.5/hedge/backends/jit/vector_expr.py -> build/bdist.linux-x86_64/egg/hedge/backends/jit
copying build/lib.linux-x86_64-2.5/hedge/backends/jit/compiler.py -> build/bdist.linux-x86_64/egg/hedge/backends/jit
copying build/lib.linux-x86_64-2.5/hedge/backends/jit/__init__.py -> build/bdist.linux-x86_64/egg/hedge/backends/jit
copying build/lib.linux-x86_64-2.5/hedge/backends/jit/lift.py -> build/bdist.linux-x86_64/egg/hedge/backends/jit
copying build/lib.linux-x86_64-2.5/hedge/backends/jit/flux.py -> build/bdist.linux-x86_64/egg/hedge/backends/jit
copying build/lib.linux-x86_64-2.5/hedge/backends/jit/diff.py -> build/bdist.linux-x86_64/egg/hedge/backends/jit
creating build/bdist.linux-x86_64/egg/hedge/backends/mpi
copying build/lib.linux-x86_64-2.5/hedge/backends/mpi/__init__.py -> build/bdist.linux-x86_64/egg/hedge/backends/mpi
copying build/lib.linux-x86_64-2.5/hedge/backends/base.py -> build/bdist.linux-x86_64/egg/hedge/backends
creating build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/vector_expr.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/__init__.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/tools.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/diff_shared_fld.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/execute.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/optemplate.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/diff_shared_segmat.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/el_local_shared_fld.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/el_local_shared_segmat.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/kernelbase.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/plan.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/backends/cuda/fluxgather.py -> build/bdist.linux-x86_64/egg/hedge/backends/cuda
copying build/lib.linux-x86_64-2.5/hedge/visualization.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/log.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/vtk.py -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/mesh.py -> build/bdist.linux-x86_64/egg/hedge
creating build/bdist.linux-x86_64/egg/hedge/timestep
creating build/bdist.linux-x86_64/egg/hedge/timestep/multirate_ab
copying build/lib.linux-x86_64-2.5/hedge/timestep/multirate_ab/__init__.py -> build/bdist.linux-x86_64/egg/hedge/timestep/multirate_ab
copying build/lib.linux-x86_64-2.5/hedge/timestep/multirate_ab/methods.py -> build/bdist.linux-x86_64/egg/hedge/timestep/multirate_ab
copying build/lib.linux-x86_64-2.5/hedge/timestep/multirate_ab/processors.py -> build/bdist.linux-x86_64/egg/hedge/timestep/multirate_ab
copying build/lib.linux-x86_64-2.5/hedge/timestep/__init__.py -> build/bdist.linux-x86_64/egg/hedge/timestep
copying build/lib.linux-x86_64-2.5/hedge/timestep/ab.py -> build/bdist.linux-x86_64/egg/hedge/timestep
copying build/lib.linux-x86_64-2.5/hedge/timestep/rk4.py -> build/bdist.linux-x86_64/egg/hedge/timestep
copying build/lib.linux-x86_64-2.5/hedge/timestep/base.py -> build/bdist.linux-x86_64/egg/hedge/timestep
copying build/lib.linux-x86_64-2.5/hedge/timestep/stability.py -> build/bdist.linux-x86_64/egg/hedge/timestep
copying build/lib.linux-x86_64-2.5/hedge/_internal.so -> build/bdist.linux-x86_64/egg/hedge
copying build/lib.linux-x86_64-2.5/hedge/iterative.py -> build/bdist.linux-x86_64/egg/hedge
creating build/bdist.linux-x86_64/egg/hedge/models
copying build/lib.linux-x86_64-2.5/hedge/models/__init__.py -> build/bdist.linux-x86_64/egg/hedge/models
copying build/lib.linux-x86_64-2.5/hedge/models/diffusion.py -> build/bdist.linux-x86_64/egg/hedge/models
copying build/lib.linux-x86_64-2.5/hedge/models/nd_calculus.py -> build/bdist.linux-x86_64/egg/hedge/models
copying build/lib.linux-x86_64-2.5/hedge/models/em.py -> build/bdist.linux-x86_64/egg/hedge/models
copying build/lib.linux-x86_64-2.5/hedge/models/poisson.py -> build/bdist.linux-x86_64/egg/hedge/models
copying build/lib.linux-x86_64-2.5/hedge/models/advection.py -> build/bdist.linux-x86_64/egg/hedge/models
copying build/lib.linux-x86_64-2.5/hedge/models/pml.py -> build/bdist.linux-x86_64/egg/hedge/models
byte-compiling build/bdist.linux-x86_64/egg/hedge/discretization.py to discretization.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/compiler.py to compiler.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/tools.py to tools.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/partition.py to partition.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/interpolation.py to interpolation.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/polynomial.py to polynomial.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/flux.py to flux.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/element.py to element.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/data.py to data.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/pde.py to pde.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/optemplate.py to optemplate.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/quadrature.py to quadrature.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/vector_expr.py to vector_expr.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/exec_common.py to exec_common.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/jit/vector_expr.py to vector_expr.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/jit/compiler.py to compiler.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/jit/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/jit/lift.py to lift.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/jit/flux.py to flux.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/jit/diff.py to diff.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/mpi/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/base.py to base.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/vector_expr.py to vector_expr.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/tools.py to tools.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/diff_shared_fld.py to diff_shared_fld.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/execute.py to execute.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/optemplate.py to optemplate.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/diff_shared_segmat.py to diff_shared_segmat.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/el_local_shared_fld.py to el_local_shared_fld.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/el_local_shared_segmat.py to el_local_shared_segmat.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/kernelbase.py to kernelbase.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/plan.py to plan.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/backends/cuda/fluxgather.py to fluxgather.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/visualization.py to visualization.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/log.py to log.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/vtk.py to vtk.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/mesh.py to mesh.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/multirate_ab/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/multirate_ab/methods.py to methods.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/multirate_ab/processors.py to processors.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/ab.py to ab.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/rk4.py to rk4.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/base.py to base.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/timestep/stability.py to stability.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/iterative.py to iterative.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/models/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/models/diffusion.py to diffusion.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/models/nd_calculus.py to nd_calculus.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/models/em.py to em.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/models/poisson.py to poisson.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/models/advection.py to advection.pyc
byte-compiling build/bdist.linux-x86_64/egg/hedge/models/pml.py to pml.pyc
creating stub loader for hedge/_internal.so
byte-compiling build/bdist.linux-x86_64/egg/hedge/_internal.py to _internal.pyc
installing package data to build/bdist.linux-x86_64/egg
running install_data
creating build/bdist.linux-x86_64/egg/include
creating build/bdist.linux-x86_64/egg/include/hedge
copying src/cpp/hedge/special_function.hpp -> build/bdist.linux-x86_64/egg/include/hedge
copying src/cpp/hedge/face_operators.hpp -> build/bdist.linux-x86_64/egg/include/hedge
copying src/cpp/hedge/volume_operators.hpp -> build/bdist.linux-x86_64/egg/include/hedge
copying src/cpp/hedge/base.hpp -> build/bdist.linux-x86_64/egg/include/hedge
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying hedge.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying hedge.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying hedge.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying hedge.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/hedge-0.91-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing hedge-0.91-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg
Extracting hedge-0.91-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding hedge 0.91 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg
Processing dependencies for hedge==0.91
Finished processing dependencies for hedge==0.91
------------------------------------------------------------------------
INSTALLING pyrticle
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pyrticle/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pyrticle/setuptools.pth
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LD_LIBRARY_PATH
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running install
running bdist_egg
running egg_info
creating pyrticle.egg-info
writing pyrticle.egg-info/PKG-INFO
writing top-level names to pyrticle.egg-info/top_level.txt
writing dependency_links to pyrticle.egg-info/dependency_links.txt
writing manifest file 'pyrticle.egg-info/SOURCES.txt'
reading manifest file 'pyrticle.egg-info/SOURCES.txt'
writing manifest file 'pyrticle.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/__init__.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/tools.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/pusher.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/hyperbolic.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/meshdata.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/cloud.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/geometry.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/log.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/units.py -> build/lib.linux-x86_64-2.5/pyrticle
copying pyrticle/distribution.py -> build/lib.linux-x86_64-2.5/pyrticle
creating build/lib.linux-x86_64-2.5/pyrticle/deposition
copying pyrticle/deposition/__init__.py -> build/lib.linux-x86_64-2.5/pyrticle/deposition
copying pyrticle/deposition/grid_base.py -> build/lib.linux-x86_64-2.5/pyrticle/deposition
copying pyrticle/deposition/grid_find.py -> build/lib.linux-x86_64-2.5/pyrticle/deposition
copying pyrticle/deposition/shape.py -> build/lib.linux-x86_64-2.5/pyrticle/deposition
copying pyrticle/deposition/grid.py -> build/lib.linux-x86_64-2.5/pyrticle/deposition
copying pyrticle/deposition/advective.py -> build/lib.linux-x86_64-2.5/pyrticle/deposition
running build_ext
building '_internal' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/cpp
creating build/temp.linux-x86_64-2.5/src/wrapper
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/cpp/tools.cpp -o build/temp.linux-x86_64-2.5/src/cpp/tools.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/wrapper/wrap_tools.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_tools.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/wrapper/wrap_grid.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_grid.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/wrapper/wrap_meshdata.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_meshdata.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/wrapper/wrap_pic.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_pic.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/wrapper/wrap_pusher.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_pusher.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/wrapper/wrap_depositor.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_depositor.o
mpicc -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_BLAS=1 -DOMPI_SKIP_MPICXX=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_MPI=1 -Isrc/cpp -I/home/andreas/work/boost-bindings -I/home/andreas/pool/include/boost-1_39 -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/hedge-0.91-py2.5-linux-x86_64.egg/hedge/../include -I/usr/include/python2.5 -c src/wrapper/wrap_main.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/wrap_main.o
gcc -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/cpp/tools.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_tools.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_grid.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_meshdata.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_pic.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_pusher.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_depositor.o build/temp.linux-x86_64-2.5/src/wrapper/wrap_main.o -L/home/andreas/pool/lib -L/home/andreas/mach/x86_64/pool/lib -lboost_python-gcc43-mt -lboost_mpi-gcc43-mt -llapack -lcblas -lf77blas -latlas -lf77blas -latlas -lgfortran -o build/lib.linux-x86_64-2.5/pyrticle/_internal.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/__init__.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/tools.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/pusher.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/hyperbolic.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/meshdata.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/cloud.py -> build/bdist.linux-x86_64/egg/pyrticle
creating build/bdist.linux-x86_64/egg/pyrticle/deposition
copying build/lib.linux-x86_64-2.5/pyrticle/deposition/__init__.py -> build/bdist.linux-x86_64/egg/pyrticle/deposition
copying build/lib.linux-x86_64-2.5/pyrticle/deposition/grid_base.py -> build/bdist.linux-x86_64/egg/pyrticle/deposition
copying build/lib.linux-x86_64-2.5/pyrticle/deposition/grid_find.py -> build/bdist.linux-x86_64/egg/pyrticle/deposition
copying build/lib.linux-x86_64-2.5/pyrticle/deposition/shape.py -> build/bdist.linux-x86_64/egg/pyrticle/deposition
copying build/lib.linux-x86_64-2.5/pyrticle/deposition/grid.py -> build/bdist.linux-x86_64/egg/pyrticle/deposition
copying build/lib.linux-x86_64-2.5/pyrticle/deposition/advective.py -> build/bdist.linux-x86_64/egg/pyrticle/deposition
copying build/lib.linux-x86_64-2.5/pyrticle/geometry.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/log.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/units.py -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/_internal.so -> build/bdist.linux-x86_64/egg/pyrticle
copying build/lib.linux-x86_64-2.5/pyrticle/distribution.py -> build/bdist.linux-x86_64/egg/pyrticle
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/tools.py to tools.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/pusher.py to pusher.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/hyperbolic.py to hyperbolic.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/meshdata.py to meshdata.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/cloud.py to cloud.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/deposition/__init__.py to __init__.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/deposition/grid_base.py to grid_base.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/deposition/grid_find.py to grid_find.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/deposition/shape.py to shape.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/deposition/grid.py to grid.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/deposition/advective.py to advective.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/geometry.py to geometry.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/log.py to log.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/units.py to units.pyc
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/distribution.py to distribution.pyc
creating stub loader for pyrticle/_internal.so
byte-compiling build/bdist.linux-x86_64/egg/pyrticle/_internal.py to _internal.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying pyrticle.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pyrticle.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pyrticle.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying pyrticle.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/pyrticle-0.90-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing pyrticle-0.90-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pyrticle-0.90-py2.5-linux-x86_64.egg
Extracting pyrticle-0.90-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding pyrticle 0.90 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/pyrticle-0.90-py2.5-linux-x86_64.egg
Processing dependencies for pyrticle==0.90
Finished processing dependencies for pyrticle==0.90
------------------------------------------------------------------------
INSTALLING pyublasext
------------------------------------------------------------------------
Creating /tmp/regression-check/run-2009-10-20-0915/pyublasext/setuptools-0.6c9-py2.5.egg-info
Creating /tmp/regression-check/run-2009-10-20-0915/pyublasext/setuptools.pth
dlinpk.f:763.72:
10 assign 30 to next
1
Warning: Deleted feature: ASSIGN statement at (1)
dlinpk.f:768.19:
20 go to next,(30, 50, 70, 110)
1
Warning: Deleted feature: Assigned GOTO statement at (1)
dlinpk.f:770.72:
assign 50 to next
1
Warning: Deleted feature: ASSIGN statement at (1)
dlinpk.f:779.72:
assign 70 to next
1
Warning: Deleted feature: ASSIGN statement at (1)
dlinpk.f:785.72:
assign 110 to next
1
Warning: Deleted feature: ASSIGN statement at (1)
**************************************
**************************************
LD_LIBRARY_PATH
**************************************
**************************************
running install
running bdist_egg
running egg_info
creating PyUblasExt.egg-info
writing requirements to PyUblasExt.egg-info/requires.txt
writing PyUblasExt.egg-info/PKG-INFO
writing top-level names to PyUblasExt.egg-info/top_level.txt
writing dependency_links to PyUblasExt.egg-info/dependency_links.txt
writing manifest file 'PyUblasExt.egg-info/SOURCES.txt'
reading manifest file 'PyUblasExt.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'PyUblasExt.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.5
creating build/lib.linux-x86_64-2.5/pyublasext
copying pyublasext/__init__.py -> build/lib.linux-x86_64-2.5/pyublasext
running build_ext
building '_internal' extension
creating build/temp.linux-x86_64-2.5
creating build/temp.linux-x86_64-2.5/src
creating build/temp.linux-x86_64-2.5/src/wrapper
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_ARPACK=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_DASKR=1 -DUSE_UMFPACK=1 -DUSE_BLAS=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/work/boost-bindings -I/usr/include/suitesparse -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/operation.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/operation.o
/home/andreas/pool/include/boost-1_39/boost/numeric/ublas/operation.hpp: In function 'V& boost::numeric::ublas::axpy_prod(const boost::numeric::ublas::coordinate_matrix<T1, L1, 0ul, IA1, TA1>&, const boost::numeric::ublas::vector_expression<E2>&, V&, bool) [with V = pyublas::numpy_vector<std::complex<double> >, T1 = std::complex<double>, L1 = boost::numeric::ublas::basic_column_major<long unsigned int, long int>, IA1 = boost::numeric::ublas::unbounded_array<long unsigned int, std::allocator<long unsigned int> >, TA1 = boost::numeric::ublas::unbounded_array<std::complex<double>, std::allocator<std::complex<double> > >, E2 = boost::numeric::ublas::vector<std::complex<double>, pyublas::numpy_array<std::complex<double> > >]':
src/cpp/pyublasext/matrix_operator.hpp:163: instantiated from 'void pyublasext::ublas_matrix_operator<MatrixType, OperandType, ResultType, MatrixHolder>::apply(const OperandType&, ResultType) const [with MatrixType = boost::numeric::ublas::coordinate_matrix<std::complex<double>, boost::numeric::ublas::basic_column_major<long unsigned int, long int>, 0ul, boost::numeric::ublas::unbounded_array<long unsigned int, std::allocator<long unsigned int> >, boost::numeric::ublas::unbounded_array<std::complex<double>, std::allocator<std::complex<double> > > >, OperandType = pyublas::numpy_vector<std::complex<double> >, ResultType = pyublas::numpy_vector<std::complex<double> >, MatrixHolder = const boost::numeric::ublas::coordinate_matrix<std::complex<double>, boost::numeric::ublas::basic_column_major<long unsigned int, long int>, 0ul, boost::numeric::ublas::unbounded_array<long unsigned int, std::allocator<long unsigned int> >, boost::numeric::ublas::unbounded_array<std::complex<double>, std::allocator<std::complex<double> > > >&]'
src/wrapper/operation.cpp:498: instantiated from here
/home/andreas/pool/include/boost-1_39/boost/numeric/ublas/operation.hpp:111: warning: unused variable 'size2'
/home/andreas/pool/include/boost-1_39/boost/numeric/ublas/operation.hpp: In function 'V& boost::numeric::ublas::axpy_prod(const boost::numeric::ublas::coordinate_matrix<T1, L1, 0ul, IA1, TA1>&, const boost::numeric::ublas::vector_expression<E2>&, V&, bool) [with V = pyublas::numpy_vector<double>, T1 = double, L1 = boost::numeric::ublas::basic_column_major<long unsigned int, long int>, IA1 = boost::numeric::ublas::unbounded_array<long unsigned int, std::allocator<long unsigned int> >, TA1 = boost::numeric::ublas::unbounded_array<double, std::allocator<double> >, E2 = boost::numeric::ublas::vector<double, pyublas::numpy_array<double> >]':
src/cpp/pyublasext/matrix_operator.hpp:163: instantiated from 'void pyublasext::ublas_matrix_operator<MatrixType, OperandType, ResultType, MatrixHolder>::apply(const OperandType&, ResultType) const [with MatrixType = boost::numeric::ublas::coordinate_matrix<double, boost::numeric::ublas::basic_column_major<long unsigned int, long int>, 0ul, boost::numeric::ublas::unbounded_array<long unsigned int, std::allocator<long unsigned int> >, boost::numeric::ublas::unbounded_array<double, std::allocator<double> > >, OperandType = pyublas::numpy_vector<double>, ResultType = pyublas::numpy_vector<double>, MatrixHolder = const boost::numeric::ublas::coordinate_matrix<double, boost::numeric::ublas::basic_column_major<long unsigned int, long int>, 0ul, boost::numeric::ublas::unbounded_array<long unsigned int, std::allocator<long unsigned int> >, boost::numeric::ublas::unbounded_array<double, std::allocator<double> > >&]'
src/wrapper/operation.cpp:498: instantiated from here
/home/andreas/pool/include/boost-1_39/boost/numeric/ublas/operation.hpp:111: warning: unused variable 'size2'
gcc -pthread -fno-strict-aliasing -fwrapv -Wall -O3 -DNDEBUG -fPIC -DUSE_LAPACK=1 -DUSE_ARPACK=1 -DPYUBLAS_HAVE_BOOST_BINDINGS=1 -DUSE_DASKR=1 -DUSE_UMFPACK=1 -DUSE_BLAS=1 -Isrc/cpp -I/home/andreas/pool/include/boost-1_39 -I/home/andreas/work/boost-bindings -I/usr/include/suitesparse -I/usr/lib/python2.5/site-packages/numpy/core/include -I/tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg/pyublas/../include -I/usr/include/python2.5 -c src/wrapper/op_daskr.cpp -o build/temp.linux-x86_64-2.5/src/wrapper/op_daskr.o
g++ -pthread -shared -Wl,-Bsymbolic-functions build/temp.linux-x86_64-2.5/src/wrapper/operation.o build/temp.linux-x86_64-2.5/src/wrapper/op_daskr.o -L/home/andreas/pool/lib -Lfortran/daskr -L/home/andreas/mach/x86_64/pool/lib -lboost_python-gcc43-mt -larpack -lumfpack -lamd -ldaskr -llapack -lcblas -lf77blas -latlas -lf77blas -latlas -lgfortran -o build/lib.linux-x86_64-2.5/pyublasext/_internal.so
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/pyublasext
copying build/lib.linux-x86_64-2.5/pyublasext/__init__.py -> build/bdist.linux-x86_64/egg/pyublasext
copying build/lib.linux-x86_64-2.5/pyublasext/_internal.so -> build/bdist.linux-x86_64/egg/pyublasext
byte-compiling build/bdist.linux-x86_64/egg/pyublasext/__init__.py to __init__.pyc
creating stub loader for pyublasext/_internal.so
byte-compiling build/bdist.linux-x86_64/egg/pyublasext/_internal.py to _internal.pyc
installing package data to build/bdist.linux-x86_64/egg
running install_data
creating build/bdist.linux-x86_64/egg/include
creating build/bdist.linux-x86_64/egg/include/pyublasext
copying src/cpp/pyublasext/bicgstab.hpp -> build/bdist.linux-x86_64/egg/include/pyublasext
copying src/cpp/pyublasext/daskr.hpp -> build/bdist.linux-x86_64/egg/include/pyublasext
copying src/cpp/pyublasext/arpack.hpp -> build/bdist.linux-x86_64/egg/include/pyublasext
copying src/cpp/pyublasext/arpack_proto.hpp -> build/bdist.linux-x86_64/egg/include/pyublasext
copying src/cpp/pyublasext/umfpack.hpp -> build/bdist.linux-x86_64/egg/include/pyublasext
copying src/cpp/pyublasext/matrix_operator.hpp -> build/bdist.linux-x86_64/egg/include/pyublasext
copying src/cpp/pyublasext/cg.hpp -> build/bdist.linux-x86_64/egg/include/pyublasext
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblasExt.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblasExt.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblasExt.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblasExt.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PyUblasExt.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/PyUblasExt-0.92.4-py2.5-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing PyUblasExt-0.92.4-py2.5-linux-x86_64.egg
creating /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblasExt-0.92.4-py2.5-linux-x86_64.egg
Extracting PyUblasExt-0.92.4-py2.5-linux-x86_64.egg to /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages
Adding PyUblasExt 0.92.4 to easy-install.pth file
Installed /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblasExt-0.92.4-py2.5-linux-x86_64.egg
Processing dependencies for PyUblasExt==0.92.4
Searching for PyUblas==0.93.1
Best match: PyUblas 0.93.1
Processing PyUblas-0.93.1-py2.5-linux-x86_64.egg
PyUblas 0.93.1 is already the active version in easy-install.pth
Using /tmp/regression-check/run-2009-10-20-0915/env/lib/python2.5/site-packages/PyUblas-0.93.1-py2.5-linux-x86_64.egg
Finished processing dependencies for PyUblasExt==0.92.4
------------------------------------------------------------------------
INSTALL OK.
------------------------------------------------------------------------
*** aksetup
534c36b,5 days ago,Switch from setuptools to distribute.
*** jhbuild
5ca5869,7 weeks ago,Add a CMake build recipe.
*** pytools
b07953c,5 days ago,Oops: actually distribute distribute_setup.py.
*** pymbolic
465f9e6,5 days ago,Oops: actually distribute distribute_setup.py.
*** pyublas
ad307d3,5 days ago,Oops: actually distribute distribute_setup.py.
*** boostmpi
9ddb101,5 days ago,Oops: actually distribute distribute_setup.py.
*** meshpy
598e4ab,5 days ago,Oops: actually distribute distribute_setup.py.
*** pylo
8fa230f,5 days ago,Oops: actually distribute distribute_setup.py.
*** codepy
5da6520,5 days ago,Oops: actually distribute distribute_setup.py.
*** pycuda
12a8a3c,5 days ago,Oops: actually distribute distribute_setup.py.
*** pyopencl
b922878,5 days ago,Oops: actually distribute distribute_setup.py.
*** pymetis
0d9c646,5 days ago,Oops: actually distribute distribute_setup.py.
*** hedge
e708a28,5 days ago,Oops: actually distribute distribute_setup.py.
*** pyrticle
a6b11e1,5 days ago,Switch from setuptools to distribute.
*** pyublasext
7d388d8,5 days ago,Oops: actually distribute distribute_setup.py.
*** quiet-beam-sampling
89207d2,2 years, 11 months ago,Add ignore file.
---------------------------------------------------------
NON-MPI TESTS
---------------------------------------------------------
---------------------------------------------------------
MPI TESTS
---------------------------------------------------------
timelimit: sending warning signal 15
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